RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MLLT3P42568 568 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 BCAMP50895 628 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 TPI1P60174 286 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 RABL3Q5HYI8 236 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 MRNIPQ6NTE8 343 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 RAB11FIP2Q7L804 512 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 APTXQ7Z2E3 356 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 OR7G3Q8NG95 312 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 BPIFB1Q8TDL5 484 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NKD2Q969F2 451 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 MECRQ9BV79 373 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PRMT8Q9NR22 394 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 OAZ3Q9UMX2 235 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 CDC14AQ9UNH5 594 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 MN1Q10571 1320 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 NEO1Q92859 1461 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 DENND3A2RUS2 1198 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 RAB19A4D1S5 217 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 TRAPPC13A5PLN9 417 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 DFFAO00273 331 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 C9P02748 559 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 AZGP1P25311 298 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 PSMC5P62195 406 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 CDH17Q12864 832 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PMS2P3Q13401 168 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 RNASEH2BQ5TBB1 312 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 GJB7Q6PEY0 223 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 IRF2BP1Q8IU81 584 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SVBPQ8N300 66 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 VWA5B2Q8N398 1253 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 OR5K1Q8NHB7 308 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PIH1D2Q8WWB5 315 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 EBNA1BP2Q99848 306 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 CRISPLD1Q9H336 500 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 POMKQ9H5K3 350 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 TAS2R3Q9NYW6 316 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PRKAG2Q9UGJ0 569 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 MSI1O43347 362 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 BMP2P12643 396 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 INHBCP55103 352 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 CDH15P55291 814 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PRKCDQ05655 676 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PROSER3Q2NL68 480 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 DDX17Q92841 729 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 TXLNGYQ9BZA5 131 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NIF3L1Q9GZT8 377 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 TMLHEQ9NVH6 421 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ZNF197O14709 1029 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SBK2P0C263 348 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 MYCLP12524 364 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 PDHA2P29803 388 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 HLA-FP30511 346 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ALDH6A1Q02252 535 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 GAD2Q05329 585 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ABRQ12979 859 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SMTNL2Q2TAL5 461 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NOMO2Q5JPE7 1267 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 IZUMO1Q8IYV9 350 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ABRAQ8N0Z2 381 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ZNF671Q8TAW3 534 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 C11orf24Q96F05 449 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 IL22Q9GZX6 179 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ATP13A3Q9H7F0 1226 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 STARD7Q9NQZ5 370 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 DHRS7Q9Y394 339 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 HCN1O60741 890 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PDGFAP04085 211 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 INHBEP58166 350 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 TEAD4Q15561 434 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SPDYE2Q495Y8 402 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NDUFAF5Q5TEU4 345 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SLC47A2Q86VL8 602 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ADGRF2Q8IZF7 708 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 C12orf45Q8N5I9 185 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 INO80EQ8NBZ0 244 aaPredicted RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 COA7Q96BR5 231 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NXPE2Q96DL1 559 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 MED15Q96RN5 788 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SAMHD1Q9Y3Z3 626 aaKnown RBP6.24□□□□□ -1.41
CLK3-212ENST00000563418 NID2Q14112 1375 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 WDR27A2RRH5 827 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 C2orf71A6NGG8 1288 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 GMFGO60234 142 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 PGLSO95336 258 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SRCP12931 536 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 GLRBP48167 497 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ZNF33BQ06732 778 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SNAPC2Q13487 334 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 NPTX1Q15818 432 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 SMIM5Q71RC9 77 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 UXS1Q8NBZ7 420 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 POF1BQ8WVV4 589 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 UPF1Q92900 1129 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLK3-212ENST00000563418 PTERQ96BW5 349 aa6.24□□□□□ -1.41
CLK3-212ENST00000563418 ZNF597Q96LX8 424 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms