RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 CNOT8Q9UFF9 292 aaKnown RBP18.27■□□□□ 0.52
KATNB1-202ENST00000562542 PRRC2CQ9Y520 2896 aaKnown RBP18.27■□□□□ 0.51
KATNB1-202ENST00000562542 FBN2P35556 2912 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 TNRC6AQ8NDV7 1962 aaKnown RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 MED13Q9UHV7 2174 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ASMTLO95671 621 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 TEAD1P28347 426 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 RFC1P35251 1148 aaPredicted RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 GARSP41250 739 aaKnown RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 SEPHS1P49903 392 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 NSUN2Q08J23 767 aaKnown RBP eCLIP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ELOA2Q8IYF1 753 aaPredicted RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 EPS8L1Q8TE68 723 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 SELENOOQ9BVL4 669 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 TBC1D10AQ9BXI6 508 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 SLAMF7Q9NQ25 335 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ACSS2Q9NR19 701 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ZNHIT2Q9UHR6 403 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 CD84Q9UIB8 345 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ERRFI1Q9UJM3 462 aaPredicted RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 PADI1Q9ULC6 663 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 FZD10Q9ULW2 581 aa18.26■□□□□ 0.51
KATNB1-202ENST00000562542 ZNF106Q9H2Y7 1883 aaKnown RBP18.26■□□□□ 0.51
KATNB1-202ENST00000562542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.25■□□□□ 0.51
KATNB1-202ENST00000562542 TTC24A2A3L6 582 aaPredicted RBP18.25■□□□□ 0.51
KATNB1-202ENST00000562542 DFFAO00273 331 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 SNX2O60749 519 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 LRCH4O75427 683 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 ANKRD34CP0C6C1 535 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 LHCGRP22888 699 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 CCL11P51671 97 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 GFERP55789 205 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 SH3BP2P78314 561 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 CHAF1BQ13112 559 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 C1QL3Q5VWW1 255 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 CPZQ66K79 652 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 CT55Q8WUE5 264 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 SLC20A1Q8WUM9 679 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 TCTN2Q96GX1 697 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 EPB41L1Q9H4G0 881 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 ACTL8Q9H568 366 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 TBC1D29Q9UFV1 150 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 RWDD2AQ9UIY3 292 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 PCDHGC4Q9Y5F7 938 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 PCDHGA6Q9Y5G7 932 aa18.25■□□□□ 0.51
KATNB1-202ENST00000562542 MN1Q10571 1320 aaPredicted RBP18.24■□□□□ 0.51
KATNB1-202ENST00000562542 SHANK1Q9Y566 2161 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 A0A1W2PQ67 120 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 NPIPB15A6NHN6 443 aaPredicted RBP18.24■□□□□ 0.51
KATNB1-202ENST00000562542 PSMD11O00231 422 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 RASSF9O75901 435 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 LDLRP01130 860 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 SLC2A4P14672 509 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 RENBPP51606 427 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 IL11RAQ14626 422 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 RFTN1Q14699 578 aaPredicted RBP18.24■□□□□ 0.51
KATNB1-202ENST00000562542 IYDQ6PHW0 289 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 ADAMTSL4Q6UY14 1074 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 CHST15Q7LFX5 561 aaPredicted RBP18.24■□□□□ 0.51
KATNB1-202ENST00000562542 AP2M1Q96CW1 435 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 MOCOSQ96EN8 888 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 C9orf72Q96LT7 481 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 NSMCE3Q96MG7 304 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 C5orf34Q96MH7 638 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 TGM7Q96PF1 710 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 MFRPQ9BY79 579 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 KCNK6Q9Y257 313 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 PRKAB1Q9Y478 270 aa18.24■□□□□ 0.51
KATNB1-202ENST00000562542 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
KATNB1-202ENST00000562542 ANKRD62A6NC57 917 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 ARGFXA6NJG6 315 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
KATNB1-202ENST00000562542 DAPK3O43293 454 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 CCP110O43303 1012 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 SOCS5O75159 536 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 RECKO95980 971 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 MT-ND3P03897 115 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 DPTQ07507 201 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 MAN2A1Q16706 1144 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 TPD52L1Q16890 204 aaPredicted RBP18.23■□□□□ 0.51
KATNB1-202ENST00000562542 KLHDC7AQ5VTJ3 777 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 TSPAN33Q86UF1 283 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 THAP4Q8WY91 577 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 SEC14L1Q92503 715 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 HERPUD2Q9BSE4 406 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 ZNF768Q9H5H4 540 aaKnown RBP18.23■□□□□ 0.51
KATNB1-202ENST00000562542 KIAA1468Q9P260 1216 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 PHTF1Q9UMS5 762 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 ZNF451Q9Y4E5 1061 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 C2CD3Q4AC94 2353 aa18.23■□□□□ 0.51
KATNB1-202ENST00000562542 WIPF3A6NGB9 483 aa18.22■□□□□ 0.51
KATNB1-202ENST00000562542 C21orf140B9A014 251 aa18.22■□□□□ 0.51
KATNB1-202ENST00000562542 F8VZ95 297 aa18.22■□□□□ 0.51
KATNB1-202ENST00000562542 HTRA2O43464 458 aaPredicted RBP18.22■□□□□ 0.51
KATNB1-202ENST00000562542 SOD1P00441 154 aa18.22■□□□□ 0.51
KATNB1-202ENST00000562542 CYP1A1P04798 512 aaPredicted RBP18.22■□□□□ 0.51
KATNB1-202ENST00000562542 PRKCSHP14314 528 aaPredicted RBP18.22■□□□□ 0.51
KATNB1-202ENST00000562542 TYRP1P17643 537 aa18.22■□□□□ 0.51
KATNB1-202ENST00000562542 TNFAIP3P21580 790 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms