RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HDAC2Q92769 488 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 INTS12Q96CB8 462 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ZNF501Q96CX3 271 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM47Q9BQJ4 181 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 IFIH1Q9BYX4 1025 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 BARHL1Q9BZE3 327 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 TKTL2Q9H0I9 626 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 PLEKHA4Q9H4M7 779 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 KIF9Q9HAQ2 790 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ASAH2Q9NR71 780 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 KRT84Q9NSB2 600 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 ORC3Q9UBD5 711 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 AASSQ9UDR5 926 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 FBXO9Q9UK97 447 aaPredicted RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 RCOR1Q9UKL0 485 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 INTS6Q9UL03 887 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 VDAC3Q9Y277 283 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 NFE2L3Q9Y4A8 694 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 LSM4Q9Y4Z0 139 aaKnown RBP3.07□□□□□ -1.92
DENND4A-205ENST00000562540 CAPN7Q9Y6W3 813 aa3.07□□□□□ -1.92
DENND4A-205ENST00000562540 UTYO14607 1347 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 PAGE4O60829 102 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 BAG4O95429 457 aaKnown RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 LINC00271P0C7V0 271 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 TNFAIP3P21580 790 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 MARK3P27448 753 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 HNRNPH1P31943 449 aaKnown RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 ICAM3P32942 547 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 TIMP3P35625 211 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 RGS2P41220 211 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 HSD17B4P51659 736 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 RPS3AP61247 264 aaKnown RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 ECT2LQ008S8 904 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM115Q12893 351 aaPredicted RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 NAE1Q13564 534 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 FRG1Q14331 258 aaKnown RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 KRT32Q14532 448 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 DRAP1Q14919 205 aaPredicted RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 CCNG2Q16589 344 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 SYT16Q17RD7 645 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 SGO1Q5FBB7 561 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 C6orf141Q5SZD1 244 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 FAM180BQ6P0A1 224 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 TMTC3Q6ZXV5 915 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 MTSS1LQ765P7 747 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 FRMD1Q8N878 549 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 PPHLN1Q8NEY8 458 aaKnown RBP3.06□□□□□ -1.92
DENND4A-205ENST00000562540 FIG4Q92562 907 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 KXD1Q9BQD3 176 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 HAUS8Q9BT25 410 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 STRA6Q9BX79 667 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 C17orf75Q9HAS0 396 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 LRRC4Q9HBW1 653 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 GPR108Q9NPR9 543 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 SIX4Q9UIU6 781 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 HAO1Q9UJM8 370 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 SNX9Q9Y5X1 595 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 KCNE2Q9Y6J6 123 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 STON1Q9Y6Q2 735 aa3.06□□□□□ -1.92
DENND4A-205ENST00000562540 A0A1W2PRG0 241 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 AKR1B15C9JRZ8 316 aaPredicted RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 TGFB1I1O43294 461 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 EXTL3O43909 919 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 HNRNPCL1O60812 293 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 IPO7O95373 1038 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 CLDN14O95500 239 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 SCGB1D1O95968 90 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 CYC1P08574 325 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 IL7RP16871 459 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 DDX5P17844 614 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 AZU1P20160 251 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 MCM3P25205 808 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 PSMA4P25789 261 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 STX2P32856 288 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 ARL3P36405 182 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 PBX3P40426 434 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 EIF2S3P41091 472 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 PIP4K2AP48426 406 aaPredicted RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 NR0B1P51843 470 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 F2RL1P55085 397 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 GEMIN4P57678 1058 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 CSTF3Q12996 717 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 EFNB3Q15768 340 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 CTF1Q16619 201 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 EIF2S3LQ2VIR3 472 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 USP41Q3LFD5 358 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM30BQ3MIR4 351 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 ATP13A5Q4VNC0 1218 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 SLC45A4Q5BKX6 768 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 HIST2H2BDQ6DRA6 164 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 B3GNT6Q6ZMB0 384 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 PXKQ7Z7A4 578 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 CCDC13Q8IYE1 715 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 TMEM116Q8NCL8 245 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 KCNH5Q8NCM2 988 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 PSPC1Q8WXF1 523 aaKnown RBP3.05□□□□□ -1.92
DENND4A-205ENST00000562540 SKA1Q96BD8 255 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 SLC41A2Q96JW4 573 aa3.05□□□□□ -1.92
DENND4A-205ENST00000562540 FAM110AQ9BQ89 295 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms