RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 PTPRNQ16849 979 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 ZNF678Q5SXM1 525 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 C22orf39Q6P5X5 142 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 TPGS1Q6ZTW0 290 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 LYSMD3Q7Z3D4 306 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 CUZD1Q86UP6 607 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 ENDOVQ8N8Q3 282 aaKnown RBP12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 STAG3L4Q8TBR4 150 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 AGR3Q8TD06 166 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 POF1BQ8WVV4 589 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 KCNJ9Q92806 393 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 BHMTQ93088 406 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 ATOH8Q96SQ7 321 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 TTC1Q99614 292 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 ERVK-6Q9BXR3 956 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 NUF2Q9BZD4 464 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 RNPEPL1Q9HAU8 725 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 TBC1D14Q9P2M4 693 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 DPP7Q9UHL4 492 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 SLC25A13Q9UJS0 675 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 INTS6Q9UL03 887 aaKnown RBP12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 MED16Q9Y2X0 877 aa12.59□□□□□ -0.39
AC055717.2-201ENST00000561864 SCN8AQ9UQD0 1980 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 DCXO43602 365 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 RB1P06400 928 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 COX4I1P13073 169 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 CTPS1P17812 591 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 CPOXP36551 454 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 INHBCP55103 352 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 OR4D1Q15615 310 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF77Q15935 545 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 ELMSAN1Q6PJG2 1045 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 CBARPQ8N350 705 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 PCDH20Q8N6Y1 951 aaKnown RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 PTGR2Q8N8N7 351 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 BIRC8Q96P09 236 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 SMIM14Q96QK8 99 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 LYSMD1Q96S90 227 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 GPR21Q99679 349 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 SMG9Q9H0W8 520 aaKnown RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 P2RY12Q9H244 342 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 WDR55Q9H6Y2 383 aaPredicted RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 PLK2Q9NYY3 685 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 NOP53Q9NZM5 478 aaKnown RBP12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 APPL1Q9UKG1 709 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 ALPK3Q96L96 1907 aa12.58□□□□□ -0.4
AC055717.2-201ENST00000561864 LINC01553A4QN01 128 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 H3BMM5 538 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 STX16-NPEPL1H3BU86 382 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 SDHDO14521 159 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 NEMP1O14524 444 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 STX16O14662 325 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF821O75541 412 aaPredicted RBP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 RHOP08100 348 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ALPIP09923 528 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 THRAP10827 490 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 HNRNPLP14866 589 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ITGALP20701 1170 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PIK3R1P27986 724 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PDCD2Q16342 344 aaPredicted RBP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 FUT11Q495W5 492 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 UNC50Q53HI1 259 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PRSS36Q5K4E3 855 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 GRAMD4Q6IC98 578 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PDE12Q6L8Q7 609 aaKnown RBP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 TXNDC11Q6PKC3 985 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 TAS2R42Q7RTR8 314 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 SNX20Q7Z614 316 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 SCUBE1Q8IWY4 988 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PHTF2Q8N3S3 785 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 RYBPQ8N488 228 aaPredicted RBP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 KIAA1958Q8N8K9 716 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 CEP70Q8NHQ1 597 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 IRF7Q92985 503 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ECHDC3Q96DC8 303 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PHF21BQ96EK2 531 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms