RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MPP1Q00013 466 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ZBTB16Q05516 673 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 NFATC2Q13469 925 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 PEX6Q13608 980 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ACOX1Q15067 660 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 INSCQ1MX18 579 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 HHATQ5VTY9 493 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FAM45BPQ6NSW5 357 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 CNSTQ6PJW8 725 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FAM151BQ6UXP7 276 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 LIPIQ6XZB0 460 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 RAPH1Q70E73 1250 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 SYNPOQ8N3V7 929 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 TXNDC5Q8NBS9 432 aaKnown RBP10.26□□□□□ -0.77
USP3-219ENST00000561326 FAM45AQ8TCE6 357 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 GANCQ8TET4 914 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 DYDC1Q8WWB3 177 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 EZH1Q92800 747 aaPredicted RBP10.26□□□□□ -0.77
USP3-219ENST00000561326 ARRDC3Q96B67 414 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 CENPTQ96BT3 561 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ULK4Q96C45 1275 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 MCMBPQ9BTE3 642 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 CAPS2Q9BXY5 557 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 SLC13A1Q9BZW2 595 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ZDHHC4Q9NPG8 344 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 MARCH4Q9P2E8 410 aaPredicted RBP10.26□□□□□ -0.77
USP3-219ENST00000561326 WNT16Q9UBV4 365 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 CRLS1Q9UJA2 301 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FBXL21Q9UKT6 434 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 NCKAP1Q9Y2A7 1128 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 CRYL1Q9Y2S2 319 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ACOT9Q9Y305 439 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 VWA7Q9Y334 891 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 BPTFQ12830 3046 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 A0A096LPK6 155 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 UBA6A0AVT1 1052 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 H3BMM5 538 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 TPP1O14773 563 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 WNT9AO14904 365 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 AREL1O15033 823 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 MID1O15344 667 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 AP1G1O43747 822 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 TYROBPO43914 113 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 ATG13O75143 517 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 GLRA3O75311 464 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 PRAMEF1O95521 474 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ALDOAP04075 364 aaKnown RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 CHN1P15882 459 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CREB1P16220 341 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ZNF7P17097 686 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 LHCGRP22888 699 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CRHR1P34998 444 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CCNFP41002 786 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 P2RY2P41231 377 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 SKIV2L2P42285 1042 aaKnown RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 LIG3P49916 1009 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 GYS2P54840 703 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ADARP55265 1226 aaKnown RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 DCDC1P59894 354 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 RAB10P61026 200 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 IL9RQ01113 521 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 SEMG2Q02383 582 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CNTN1Q12860 1018 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CCINQ13939 588 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 LRRC32Q14392 662 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CHRNA6Q15825 494 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ZNF284Q2VY69 593 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 TTC31Q49AM3 519 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 TMEM52BQ4KMG9 183 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 LRRC73Q5JTD7 316 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 KYAT3Q6YP21 454 aaKnown RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 SH2D5Q6ZV89 423 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CYP2U1Q7Z449 544 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 HSD11B1LQ7Z5J1 315 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 LDB1Q86U70 411 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 TMPRSS6Q8IU80 811 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 RBFAQ8N0V3 343 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 HDDC3Q8N4P3 179 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ANKRD42Q8N9B4 389 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 GPR26Q8NDV2 337 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CXorf40AQ8TE69 158 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 ISL2Q96A47 359 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 KLF6Q99612 283 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 ZSCAN5AQ9BUG6 496 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 SPATA16Q9BXB7 569 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 CLPBQ9H078 707 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 VPS11Q9H270 941 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 FAM96AQ9H5X1 160 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 SNX15Q9NRS6 342 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 MKS1Q9NXB0 559 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 TAS2R13Q9NYV9 303 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 THEGQ9P2T0 379 aa10.25□□□□□ -0.77
USP3-219ENST00000561326 NFKBIL1Q9UBC1 381 aaPredicted RBP10.25□□□□□ -0.77
USP3-219ENST00000561326 NDRG2Q9UN36 371 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms