RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PCDHGA8Q9Y5G5 932 aa15.9■□□□□ 0.14
LMX1B-204ENST00000561065 SOWAHDA6NJG2 315 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CDRT15L2A8MXV6 281 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CLDN7O95471 211 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 IVLP07476 585 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 GLB1P16278 677 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 GPR1P46091 355 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 VAV2P52735 878 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 ERVPABLB-1P60509 514 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 RPL26P61254 145 aaKnown RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 AP1B1Q10567 949 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 TFDP3Q5H9I0 405 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC181Q5TID7 509 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC70Q6NSX1 233 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 MFSD7Q6UXD7 560 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 ZNF765Q7L2R6 523 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC50Q8IVM0 306 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 KATNAL2Q8IYT4 538 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 LSMEM2Q8N112 164 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 Q8N9G6 341 aaPredicted RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 SPC24Q8NBT2 197 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 ZNF248Q8NDW4 579 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 EXD1Q8NHP7 514 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 P3H4Q92791 437 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 GRAMD1AQ96CP6 724 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 SCARF2Q96GP6 870 aaPredicted RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 LIN37Q96GY3 246 aaPredicted RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 SLC46A1Q96NT5 459 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 GFM1Q96RP9 751 aaKnown RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 TRIB3Q96RU7 358 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 LRRN3Q9H3W5 708 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 DPEP2Q9H4A9 486 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 TRNAU1APQ9NX07 287 aaKnown RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 TAAR2Q9P1P5 351 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 APPL1Q9UKG1 709 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 RPL26L1Q9UNX3 145 aaKnown RBP15.89■□□□□ 0.13
LMX1B-204ENST00000561065 TMEM98Q9Y2Y6 226 aa15.89■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC187A0A096LP49 1063 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC66A2RUB6 948 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 FGF1P05230 155 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
LMX1B-204ENST00000561065 MARCKSL1P49006 195 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 DYNLT1P63172 113 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 CTBSQ01459 385 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 GALNT3Q14435 633 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 FOXR1Q6PIV2 292 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 SLC30A9Q6PML9 568 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 WDR36Q8NI36 951 aaKnown RBP15.88■□□□□ 0.13
LMX1B-204ENST00000561065 EID2BQ96D98 161 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 COX14Q96I36 57 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 FCRL3Q96P31 734 aaPredicted RBP15.88■□□□□ 0.13
LMX1B-204ENST00000561065 RIOK2Q9BVS4 552 aaKnown RBP15.88■□□□□ 0.13
LMX1B-204ENST00000561065 ADGRE3Q9BY15 652 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 EPB41L5Q9HCM4 733 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 THSD1Q9NS62 852 aa15.88■□□□□ 0.13
LMX1B-204ENST00000561065 OAS3Q9Y6K5 1087 aaKnown RBP15.88■□□□□ 0.13
LMX1B-204ENST00000561065 C1orf232A0A0U1RR37 186 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 FADS2P1A8MWK0 482 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 INPP4BO15327 924 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 PJA2O43164 708 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 NUDT21O43809 227 aaKnown RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 HGFP14210 728 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 PECAM1P16284 738 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 ADCY8P40145 1251 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 ADCY2Q08462 1091 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 ILF3Q12906 894 aaKnown RBP eCLIP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 LLGL1Q15334 1064 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 TAZQ16635 292 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 HENMT1Q5T8I9 393 aaKnown RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 ZNF438Q7Z4V0 828 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 CLEC14AQ86T13 490 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 RAVER1Q8IY67 606 aaKnown RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 NAGSQ8N159 534 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 UBL4BQ8N7F7 174 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 CCDC112Q8NEF3 446 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 OR6C4Q8NGE1 309 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 ZDHHC1Q8WTX9 485 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 TADA1Q96BN2 335 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 OR2M4Q96R27 311 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 SRPK1Q96SB4 655 aaKnown RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 GSDMCQ9BYG8 508 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 TSGA10Q9BZW7 698 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 LRIT1Q9P2V4 623 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 SAE1Q9UBE0 346 aaPredicted RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 CNOT6Q9ULM6 557 aaKnown RBP15.87■□□□□ 0.13
LMX1B-204ENST00000561065 EFR3BQ9Y2G0 817 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 KALRNO60229 2985 aa15.87■□□□□ 0.13
LMX1B-204ENST00000561065 CST8O60676 142 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 TNFSF15O95150 251 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 ECEL1O95672 775 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 PYGLP06737 847 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 PNLIPP16233 465 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 CCKBRP32239 447 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 CDKN2BP42772 138 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 SPINT3P49223 89 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 INHBCP55103 352 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 RWDD2BP57060 319 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 B4GALNT1Q00973 533 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 NR1D2Q14995 579 aa15.86■□□□□ 0.13
LMX1B-204ENST00000561065 PRKD1Q15139 912 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms