RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CEP290O15078 2479 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 DENND4AQ7Z401 1863 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF106Q9H2Y7 1883 aaKnown RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 GLYATL1P3A0A0U1RQE8 302 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TMEM114B3SHH9 223 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 GAPDHSO14556 408 aaPredicted RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TRIM13O60858 407 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 RHOBTB1O94844 696 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 PRAMEF1O95521 474 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 PYGLP06737 847 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 PRSS56P0CW18 603 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 CCDC166P0CW27 439 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TIMP2P16035 220 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 KCNA4P22459 653 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 RPS3P23396 243 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 GDI1P31150 447 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 VIPR1P32241 457 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 GRIA2P42262 883 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 SKIV2L2P42285 1042 aaKnown RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TIAL1Q01085 375 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 DLX2Q07687 328 aaPredicted RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 DLG1Q12959 904 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 NFATC2Q13469 925 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 GRM2Q14416 872 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF460Q14592 562 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 PARM1Q6UWI2 310 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TAS2R42Q7RTR8 314 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TSPAN33Q86UF1 283 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 OR8D1Q8WZ84 308 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 PBXIP1Q96AQ6 731 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TMEM245Q9H330 911 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 POMKQ9H5K3 350 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 B4GALT6Q9UBX8 382 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 OAS3Q9Y6K5 1087 aaKnown RBP17.04■□□□□ 0.32
HDDC3-206ENST00000561036 DOCK8Q8NF50 2099 aa17.04■□□□□ 0.32
HDDC3-206ENST00000561036 TBC1D3BA6NDS4 549 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 AGAP14A8MT82 685 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 H3BMM5 538 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 PRMT5O14744 637 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 VPS26AO75436 327 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CTSLP07711 333 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF7P17097 686 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 FMO4P31512 558 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 LTBRP36941 435 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CDKN1CP49918 316 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 PTSQ03393 145 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 IFT88Q13099 833 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 ARHGEF7Q14155 803 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CSHL1Q14406 222 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 LIPMQ5VYY2 423 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 FAM151BQ6UXP7 276 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CRLF3Q8IUI8 442 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 SUGP1Q8IWZ8 645 aaKnown RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 RBFAQ8N0V3 343 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 KCNJ9Q92806 393 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 ULK4Q96C45 1275 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CCDC126Q96EE4 140 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 BIRC8Q96P09 236 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 SIKE1Q9BRV8 207 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 CDH19Q9H159 772 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 P2RY12Q9H244 342 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 FAM96AQ9H5X1 160 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 ASB8Q9H765 288 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 PKD2L2Q9NZM6 624 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 NFKBIL1Q9UBC1 381 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-206ENST00000561036 SUN2Q9UH99 717 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 USH1CQ9Y6N9 552 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 COL4A3Q01955 1670 aa17.03■□□□□ 0.32
HDDC3-206ENST00000561036 MUC22E2RYF6 1773 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SCN8AQ9UQD0 1980 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 PDE4DIPQ5VU43 2346 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 TRANK1O15050 2925 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 A0A0U1RQS6 177 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 A0A1W2PPC1 479 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CCT8L1PA6NM43 557 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 ARNTLO00327 626 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 NPC1O15118 1278 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SNUPNO95149 360 aaKnown RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 KAT7O95251 611 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 C1SP09871 688 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SBK3P0C264 359 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 LHCGRP22888 699 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 XPAP23025 273 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SLC1A6P48664 564 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 SPINT3P49223 89 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 DCDC1P59894 354 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 DNAJB13P59910 316 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 ABCE1P61221 599 aaKnown RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 MESP2Q0VG99 397 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 ITGA9Q13797 1035 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 ELAVL3Q14576 367 aaKnown RBP17.02■□□□□ 0.32
HDDC3-206ENST00000561036 ZNF234Q14588 700 aa17.02■□□□□ 0.32
HDDC3-206ENST00000561036 CHRNA6Q15825 494 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms