RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 LEPRP48357 1165 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 CDC20Q12834 499 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 SF3B4Q15427 424 aaKnown RBP eCLIP13.93□□□□□ -0.181e-8■■■■■ 55.8
RABGGTA-220ENST00000560998 NEDD8Q15843 81 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 PPM1JQ5JR12 505 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 MANEALQ5VSG8 457 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 BROXQ5VW32 411 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 PLEKHG7Q6ZR37 379 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 ARHGAP12Q8IWW6 846 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 PEX5LQ8IYB4 626 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 TXNDC15Q96J42 360 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 MAELQ96JY0 434 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 GLT1D1Q96MS3 346 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 YME1L1Q96TA2 773 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 RBBP8Q99708 897 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 SEZ6LQ9BYH1 1024 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 CPNE5Q9HCH3 593 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 AGPAT4Q9NRZ5 378 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 CACNA2D2Q9NY47 1150 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 ABT1Q9ULW3 272 aaKnown RBP13.93□□□□□ -0.18
RABGGTA-220ENST00000560998 MAGEB16A2A368 324 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SAC3D1A6NKF1 404 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DFFAO00273 331 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 NUAK1O60285 661 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DEAF1O75398 565 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CABYRO75952 493 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DDHD2O94830 711 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 OR4Q2P0C623 313 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TFEBP19484 476 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CCNCP24863 283 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 HTR7P34969 479 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 GRIA3P42263 894 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 ACLYP53396 1101 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 PRPSAP1Q14558 356 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SMUG1Q53HV7 270 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TTC23LQ6PF05 361 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 ZYG11AQ6WRX3 759 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 ARHGAP36Q6ZRI8 547 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 USP51Q70EK9 711 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 EPHX4Q8IUS5 362 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 IQCF2Q8IXL9 164 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SFRP1Q8N474 314 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DHRSXQ8N5I4 330 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SIAEQ9HAT2 523 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 NMUR1Q9HB89 426 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SACM1LQ9NTJ5 587 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 UBP1Q9NZI7 540 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TMEM181Q9P2C4 612 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 RBMX2Q9Y388 322 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 H0YAE9 185 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 KMOO15229 486 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 FGF10O15520 208 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 PSMD3O43242 534 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SRP72O76094 671 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CKBP12277 381 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 IL10P22301 178 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 FASP25445 335 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CCR1P32246 355 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 LIMK2P53671 638 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DSC1Q08554 894 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SQLEQ14534 574 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SLC39A12Q504Y0 691 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 REP15Q6BDI9 236 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TRAF7Q6Q0C0 670 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 OTOP3Q7RTS5 596 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 PTAR1Q7Z6K3 402 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 STRA8Q7Z7C7 330 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 DCLK2Q8N568 766 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 USP33Q8TEY7 942 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CYGBQ8WWM9 190 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 CENPNQ96H22 339 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 AGAP2Q99490 1192 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 OSBPL10Q9BXB5 764 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 NMRAL1Q9HBL8 299 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 SMPD3Q9NY59 655 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 ANKRD6Q9Y2G4 727 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TIMM22Q9Y584 194 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 TTC3P53804 2025 aa13.92□□□□□ -0.18
RABGGTA-220ENST00000560998 A0A1W2PQH9 124 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 SEC24DO94855 1032 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 PIGNO95427 931 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 EOMESO95936 686 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 CHEK2O96017 543 aa13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 S100BP04271 92 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-220ENST00000560998 TPH1P17752 444 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms