RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 NETO2Q8NC67 525 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 ZNF606Q8WXB4 792 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 VOPP1Q96AW1 172 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 PAGE5Q96GU1 130 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 CPXM1Q96SM3 734 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 BARD1Q99728 777 aaKnown RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 HERPUD2Q9BSE4 406 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 TBC1D10AQ9BXI6 508 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 TEX101Q9BY14 249 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 RETREG1Q9H6L5 497 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 ATP13A3Q9H7F0 1226 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 ZNHIT2Q9UHR6 403 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 SLC17A4Q9Y2C5 497 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 NTNG1Q9Y2I2 539 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 PLEKHM1Q9Y4G2 1056 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 PIKFYVEQ9Y2I7 2098 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 TMEM200CA6NKL6 621 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 A8MX80 341 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 I6L893 689 aaPredicted RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 GRID2O43424 1007 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 CPNE3O75131 537 aaKnown RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 C9P02748 559 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 FUCA1P04066 466 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 POLD2P49005 469 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 PPP2R2AP63151 447 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 GCNT1Q02742 428 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 TUBB3Q13509 450 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 LLGL1Q15334 1064 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 CACHD1Q5VU97 1274 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 OTUD1Q5VV17 481 aaPredicted RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 AFMIDQ63HM1 303 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 DENND2CQ68D51 928 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 MTFR2Q6P444 385 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 OLFML1Q6UWY5 402 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 RPTNQ6XPR3 784 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 MARK2Q7KZI7 788 aaKnown RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 DPPA4Q7L190 304 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 RAB43Q86YS6 212 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 PELI3Q8N2H9 469 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 LZTR1Q8N653 840 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 CLEC1AQ8NC01 280 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 ITLN2Q8WWU7 325 aaPredicted RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 PGAP3Q96FM1 320 aaPredicted RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 FCRL4Q96PJ5 515 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 TRAPPC9Q96Q05 1148 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 NPY6RQ99463 290 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 TSG101Q99816 390 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 WASH6PQ9NQA3 447 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 ARMCX3Q9UH62 379 aaPredicted RBP9.45□□□□□ -0.9
HERC1-210ENST00000560897 ST14Q9Y5Y6 855 aa9.45□□□□□ -0.9
HERC1-210ENST00000560897 KIR2DS5A0A0G2JLQ3 304 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 A0A0G2JNG1 304 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 LILRA5A6NI73 299 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 KIR2DS3K7RE56 304 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 E2F3O00716 465 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 SNX2O60749 519 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 UBXN7O94888 489 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TIAF1O95411 115 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 YEATS4O95619 227 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 RHOQP17081 205 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TYRP1P17643 537 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 ME1P48163 572 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 FMO5P49326 533 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 KRTAP10-9P60411 292 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TLE4Q04727 773 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 KIR2DS5Q14953 304 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TMCO4Q5TGY1 634 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 IGFL3Q6UXB1 125 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 CUZD1Q86UP6 607 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 FAM131BQ86XD5 332 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 ZDHHC17Q8IUH5 632 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 PASD1Q8IV76 773 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 CEP97Q8IW35 865 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 ENDOVQ8N8Q3 282 aaKnown RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 SIDT2Q8NBJ9 832 aaKnown RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 CHDHQ8NE62 594 aaPredicted RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 ADAMTS17Q8TE56 1095 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 GRHL3Q8TE85 626 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 C14orf79Q96F83 325 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TBCBQ99426 244 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 NDFIP2Q9NV92 336 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 TMEM248Q9NWD8 314 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 UBA2Q9UBT2 640 aaPredicted RBP9.44□□□□□ -0.9
HERC1-210ENST00000560897 DCHS2Q6V1P9 2916 aa9.44□□□□□ -0.9
HERC1-210ENST00000560897 OR5K4A6NMS3 321 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 TFE3P19532 575 aaPredicted RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 SYT1P21579 422 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 GPR1P46091 355 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms