RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMCO5BA8MYB1 307 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 TRAFD1O14545 582 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 PRPSAP2O60256 369 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 SOCS5O75159 536 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 VPS4BO75351 444 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 RNF8O76064 485 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 EEF1GP26641 437 aaKnown RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 DLSTP36957 453 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 EPHB1P54762 984 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 GSCP56915 257 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 MAXP61244 160 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 UBE2HP62256 183 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 MC2RQ01718 297 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ITKQ08881 620 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 NSUN2Q08J23 767 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 SLC10A7Q0GE19 358 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ERV3-1Q14264 604 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 CA9Q16790 459 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 RFX8Q6ZV50 586 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 MON1BQ7L1V2 547 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 CHST15Q7LFX5 561 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 TIPARPQ7Z3E1 657 aaKnown RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 TSPAN33Q86UF1 283 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 PHF13Q86YI8 300 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 NDUFAF2Q8N183 169 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 NEK11Q8NG66 645 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 AP2M1Q96CW1 435 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 KCTD15Q96SI1 283 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ZPBPQ9BS86 351 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 SNRNP25Q9BV90 132 aaKnown RBP10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ULBP3Q9BZM4 244 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 CHMP5Q9NZZ3 219 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 PHTF1Q9UMS5 762 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 VPS4AQ9UN37 437 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 PRKAB1Q9Y478 270 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 KCTD3Q9Y597 815 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 ST14Q9Y5Y6 855 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 RPS6KL1Q9Y6S9 549 aa10.43□□□□□ -0.74
CDC42BPB-207ENST00000560492 TEX15Q9BXT5 2789 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 RELNP78509 3460 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 A0A0U1RQS6 177 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 CDC14CA4D256 554 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 TTLL8A6PVC2 850 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 LHCGRP22888 699 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 JAM2P57087 298 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 PTPRRQ15256 657 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 ARMC12Q5T9G4 340 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 ASB18Q6ZVZ8 466 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 RASGRP3Q8IV61 690 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 ARHGAP12Q8IWW6 846 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 ESX1Q8N693 406 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 NPWQ8N729 165 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 BMPERQ8N8U9 685 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 MIB2Q96AX9 1013 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 SH3KBP1Q96B97 665 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 STAMBPL1Q96FJ0 436 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 ELMO2Q96JJ3 720 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 PSKH2Q96QS6 385 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 NOD2Q9HC29 1040 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 MAP10Q9P2G4 905 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 SLC17A4Q9Y2C5 497 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 TTLL3Q9Y4R7 772 aa10.42□□□□□ -0.74
CDC42BPB-207ENST00000560492 EIF3CLB5ME19 914 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 PSMD11O00231 422 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 EPHB6O15197 1021 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 RFPL1O75677 317 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 RASSF9O75901 435 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ATP1A1P05023 1023 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ACP5P13686 325 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 SLC2A4P14672 509 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 TNFAIP3P21580 790 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 CASP14P31944 242 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 HSPA9P38646 679 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ARL4AP40617 200 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 STAT5AP42229 794 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 FASLGP48023 281 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 OGDHQ02218 1023 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 TRAF2Q12933 501 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 SQSTM1Q13501 440 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 LRP8Q14114 963 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 PYCR3Q53H96 274 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 FHL5Q5TD97 284 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 LRRC66Q68CR7 880 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 WDR74Q6RFH5 385 aaPredicted RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 RFLNAQ6ZTI6 216 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 SLC9B2Q86UD5 537 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 CCDC13Q8IYE1 715 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ATPAF2Q8N5M1 289 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ANKRD20A12PQ8NF67 263 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 SCAMP4Q969E2 229 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 NSMCE3Q96MG7 304 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ZNF599Q96NL3 588 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 PSMG3-AS1Q96PY0 264 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 EIF3CQ99613 913 aaKnown RBP10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 ABCG8Q9H221 673 aa10.41□□□□□ -0.74
CDC42BPB-207ENST00000560492 OSGEPL1Q9H4B0 414 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms