RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 RHOXF2BP0C7M4 288 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 KRT10P13645 584 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CCNB1P14635 433 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CD82P27701 267 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 SLC5A2P31639 672 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CXCR5P32302 372 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CDH6P55285 790 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ZFP36L1Q07352 338 aaKnown RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ILF3Q12906 894 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 KCTD16Q68DU8 428 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 C8orf74Q6P047 294 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 XKR5Q6UX68 686 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 USP45Q70EL2 814 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 JAMLQ86YT9 394 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 GPBAR1Q8TDU6 330 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 COG1Q8WTW3 980 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 MED8Q96G25 268 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 HES6Q96HZ4 224 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CMKLR1Q99788 373 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 RHOXF2Q9BQY4 288 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 TEX101Q9BY14 249 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 PARD6BQ9BYG5 372 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 TRIM7Q9C029 511 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 B3GNT4Q9C0J1 378 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 TMEM168Q9H0V1 697 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 CARD9Q9H257 536 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 DPEP2Q9H4A9 486 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 MRPL40Q9NQ50 206 aaKnown RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 TRNAU1APQ9NX07 287 aaKnown RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 AKAP7Q9P0M2 348 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 RCOR3Q9P2K3 495 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 LRIT1Q9P2V4 623 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 PHTF1Q9UMS5 762 aa13.55□□□□□ -0.24
SMAD3-214ENST00000560402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD3-214ENST00000560402 ASH1LQ9NR48 2969 aaKnown RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 CASC3O15234 703 aaKnown RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 MAFKO60675 156 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 PEX11BO96011 259 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 SLC1A1P43005 524 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 NR1D2Q14995 579 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 SEL1L2Q5TEA6 688 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 WDR93Q6P2C0 686 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 ZNF438Q7Z4V0 828 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 HEATR4Q86WZ0 1026 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 C17orf82Q86X59 251 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 NIPA2Q8N8Q9 360 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 CSPG4P5Q96PW8 444 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 MCCC1Q96RQ3 725 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 LGR4Q9BXB1 951 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 FRMD8Q9BZ67 464 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 CARS2Q9HA77 564 aaKnown RBP13.54□□□□□ -0.24
SMAD3-214ENST00000560402 HAUS2Q9NVX0 235 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 PISDQ9UG56 409 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 DNPEPQ9ULA0 475 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 RNF215Q9Y6U7 377 aa13.54□□□□□ -0.24
SMAD3-214ENST00000560402 J3QKU1 62 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 CPNE6O95741 557 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 PYGLP06737 847 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 IVLP07476 585 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 IL1R2P27930 398 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 CETN2P41208 172 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 MMP13P45452 471 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 CDK3Q00526 305 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 DPTQ07507 201 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 GPS2Q13227 327 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 MESDQ14696 234 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 SMTNL2Q2TAL5 461 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 MARC1Q5VT66 337 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 RAET1GQ6H3X3 334 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 NDUFAF2Q8N183 169 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 PELI3Q8N2H9 469 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 Q8N9G6 341 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-214ENST00000560402 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
SMAD3-214ENST00000560402 HSPH1Q92598 858 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 SCRN2Q96FV2 425 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 CDH19Q9H159 772 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 ANKZF1Q9H8Y5 726 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 PCDH18Q9HCL0 1135 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 PPIL1Q9Y3C6 166 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms