RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 PEX26Q7Z412 305 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 PROSER1Q86XN7 944 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 GKN2Q86XP6 184 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 NRSN1Q8IZ57 195 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 FAM46DQ8NEK8 389 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 HTR3CQ8WXA8 447 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 GORASP1Q9BQQ3 440 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ABCG4Q9H172 646 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 SPATS2LQ9NUQ6 558 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 NCKIPSDQ9NZQ3 722 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 DNPEPQ9ULA0 475 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ZNF711Q9Y462 761 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 OAS3Q9Y6K5 1087 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 ZFHX4Q86UP3 3567 aa11.59□□□□□ -0.55
RABGGTA-216ENST00000560243 BPTFQ12830 3046 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 HACD1B0YJ81 288 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 B4DGG1 531 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 MTSS1O43312 755 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 NOBOXO60393 691 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 CSO75390 466 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ATP1A1P05023 1023 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ADCY8P40145 1251 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 RPIAP49247 311 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 EIF3EP60228 445 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 XRCC4Q13426 336 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC14A2Q15849 920 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SIRPB2Q5JXA9 342 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ZNF648Q5T619 568 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 HENMT1Q5T8I9 393 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 OGFOD3Q6PK18 319 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 NLRP8Q86W28 1048 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SDR16C5Q8N3Y7 309 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC25A41Q8N5S1 370 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 GPR26Q8NDV2 337 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 GPR156Q8NFN8 814 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 GPBAR1Q8TDU6 330 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 GLMNQ92990 594 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 CCDC74AQ96AQ1 378 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 SCARF2Q96GP6 870 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 COX14Q96I36 57 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 FCRL5Q96RD9 977 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 CCDC3Q9BQI4 270 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 FAM83DQ9H4H8 585 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 MAGEE1Q9HCI5 957 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 ARFGAP3Q9NP61 516 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 EVA1BQ9NVM1 165 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 FAM153AQ9UHL3 310 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 AMFRQ9UKV5 643 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 EFR3BQ9Y2G0 817 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 PRKAB1Q9Y478 270 aa11.58□□□□□ -0.56
RABGGTA-216ENST00000560243 LOC285095A0A1B0GVY8 99 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 A0A1W2PNU3 283 aaPredicted RBP11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 TCRBV7S2A1N4TA0A589 114 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 IVLP07476 585 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 RBP3P10745 1247 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 CTBSQ01459 385 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 OLIG2Q13516 323 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC30A9Q6PML9 568 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 TMC3Q7Z5M5 1100 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 CACTIN-AS1Q8N1I8 211 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 IPMKQ8NFU5 416 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 CCHCR1Q8TD31 782 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 PATE1Q8WXA2 126 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 NAT6Q93015 286 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 VAT1Q99536 393 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 GPR63Q9BZJ6 419 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 DPEP2Q9H4A9 486 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 SYNDIG1Q9H7V2 258 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 BPIFA1Q9NP55 256 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 TRNAU1APQ9NX07 287 aaKnown RBP11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 PKD2L2Q9NZM6 624 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 TAAR2Q9P1P5 351 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 RSPH14Q9UHP6 348 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 GPSM3Q9Y4H4 160 aa11.57□□□□□ -0.56
RABGGTA-216ENST00000560243 FAM208BQ5VWN6 2430 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 PMS2P1A4D2B8 440 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 RGSL1A5PLK6 1076 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 GOLGA6L6A8MZA4 724 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 KCNN4O15554 427 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 TJP3O95049 919 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 ASMTLO95671 621 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 AGTP01019 485 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 FGF1P05230 155 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 BPIP17213 487 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 PDX1P52945 283 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 MAZP56270 477 aaKnown RBP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 GSDMDP57764 484 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 CCL7P80098 99 aa11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 ILF3Q12906 894 aaKnown RBP eCLIP11.56□□□□□ -0.56
RABGGTA-216ENST00000560243 RTP5Q14D33 572 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms