RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SDR42E2A6NKP2 422 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 EFCAB8A8MWE9 144 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PFDN6O15212 129 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 RAD51BO15315 384 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 LDB2O43679 373 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 VEGFDO43915 354 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 USP12O75317 370 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 RASGRP1O95267 797 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 CSF2P04141 144 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 WNT1P04628 370 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PCCBP05166 539 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PIRTP0C851 137 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 BPIP17213 487 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PAMP19021 973 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 CDK3Q00526 305 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SEMG2Q02383 582 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SPARCL1Q14515 664 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 TRIP13Q15645 432 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 HLA-BQ31612 363 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 LDLRAP1Q5SW96 308 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 LYPLAL1Q5VWZ2 237 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 C8orf74Q6P047 294 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PHYKPLQ8IUZ5 450 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PDIK1LQ8N165 341 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 NAT8LQ8N9F0 302 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 OR56A4Q8NGH8 313 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SCG3Q8WXD2 468 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF514Q96K75 400 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 ERP44Q9BS26 406 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 EDEM2Q9BV94 578 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 RIOK2Q9BVS4 552 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SPATA16Q9BXB7 569 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 FOXP3Q9BZS1 431 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC13A1Q9BZW2 595 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 GAREM1Q9H706 876 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 FZD3Q9NPG1 666 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 MBNL1Q9NR56 388 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 EVA1BQ9NVM1 165 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SMOXQ9NWM0 555 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 WHRNQ9P202 907 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC30A1Q9Y6M5 507 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF292O60281 2723 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 A0A1B0GTQ1 180 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 ESPNB1AK53 854 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 QSOX1O00391 747 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 TTI1O43156 1089 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 KCNJ13O60928 360 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 TNFP01375 233 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 RALBP11234 206 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 NME1P15531 152 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 ITGALP20701 1170 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 VPS41P49754 854 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF140P52738 457 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 CLDN2P57739 230 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 PPARDQ03181 441 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 ACVR1Q04771 509 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 CBLBQ13191 982 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 LRP8Q14114 963 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 POU6F1Q14863 301 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 ELOCQ15369 112 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 DNAJC21Q5F1R6 531 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 AARS2Q5JTZ9 985 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 DNTTIP2Q5QJE6 756 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 RNASEH2BQ5TBB1 312 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 IZUMO3Q5VZ72 239 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 CERS6Q6ZMG9 384 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 HEATR4Q86WZ0 1026 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 LMNTD2Q8IXW0 634 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 MMGT1Q8N4V1 131 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 MINDY1Q8N5J2 469 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 GPR26Q8NDV2 337 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 OR4K2Q8NGD2 314 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 SCAMP4Q969E2 229 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 GLYATL1Q969I3 302 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 EID2BQ96D98 161 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 COX14Q96I36 57 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 TTC25Q96NG3 672 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 MYOCQ99972 504 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 DUSP23Q9BVJ7 150 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 GTPBP2Q9BX10 602 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 PHACTR1Q9C0D0 580 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 TRIM39Q9HCM9 518 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 IL26Q9NPH9 171 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 NCKIPSDQ9NZQ3 722 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 SPASTQ9UBP0 616 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 KLQ9UEF7 1012 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 TCAF1Q9Y4C2 921 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 SNX11Q9Y5W9 270 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 PLXNB3Q9ULL4 1909 aa11.98□□□□□ -0.49
RABGGTA-215ENST00000560207 COL5A1P20908 1838 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 GVINP1Q7Z2Y8 2422 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 VPS13AQ96RL7 3174 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 AGAP14A8MT82 685 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms