RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 LYSMD3Q7Z3D4 306 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 TTC13Q8NBP0 860 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 CCL4L1Q8NHW4 92 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
SMAD3-213ENST00000560175 NAT6Q93015 286 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 NRSN2Q9GZP1 204 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 PKD2L2Q9NZM6 624 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 VPS18Q9P253 973 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-213ENST00000560175 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 PACSIN2Q9UNF0 486 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-213ENST00000560175 CLCA2Q9UQC9 943 aa13.14□□□□□ -0.31
SMAD3-213ENST00000560175 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 H7C0C1 242 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 NTN3O00634 580 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-213ENST00000560175 DNAJC6O75061 913 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PMPCBO75439 489 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 FTCDO95954 541 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 MT-CO3P00414 261 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PNLIPP16233 465 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ADRA1AP35348 466 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 HMGCLP35914 325 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ATP5OP48047 213 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 CLDN6P56747 220 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 EIF3EP60228 445 aaKnown RBP13.13□□□□□ -0.31
SMAD3-213ENST00000560175 CCZ1BP86790 482 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 CCZ1P86791 482 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-213ENST00000560175 MSLNQ13421 630 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-213ENST00000560175 SLC1A5Q15758 541 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PCSK7Q16549 785 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ANKRD20A2Q5SQ80 823 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ANKRD20A1Q5TYW2 823 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 RANBP10Q6VN20 620 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 EFL1Q7Z2Z2 1120 aaKnown RBP13.13□□□□□ -0.31
SMAD3-213ENST00000560175 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 PROSER1Q86XN7 944 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 TTC30BQ8N4P2 665 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 GPR26Q8NDV2 337 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 SLC35B2Q8TB61 432 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 GRAMD1AQ96CP6 724 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 GBA3Q9H227 469 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 C10orf88Q9H8K7 445 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 UBP1Q9NZI7 540 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 APPL1Q9UKG1 709 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ZMIZ1Q9ULJ6 1067 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 SUFUQ9UMX1 484 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 GPR34Q9UPC5 381 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 ZNF711Q9Y462 761 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 SPO11Q9Y5K1 396 aa13.13□□□□□ -0.31
SMAD3-213ENST00000560175 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 AURKAO14965 403 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 TCEA3O75764 348 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 ANXA9O76027 345 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 FGF1P05230 155 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 HLA-DPA1P20036 260 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 ADCY8P40145 1251 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 POLD2P49005 469 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 HLTFQ14527 1009 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 TAF8Q7Z7C8 310 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 CDKL3Q8IVW4 592 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 TRAM1L1Q8N609 369 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 KYQ8NBH2 561 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 FAM46DQ8NEK8 389 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 C19orf43Q9BQ61 176 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 ZSCAN5AQ9BUG6 496 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 RMI1Q9H9A7 625 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 ARNT2Q9HBZ2 717 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 HACD3Q9P035 362 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 IL17CQ9P0M4 197 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 DOLKQ9UPQ8 538 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 SHOC2Q9UQ13 582 aa13.12□□□□□ -0.31
SMAD3-213ENST00000560175 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 URB1O60287 2271 aaKnown RBP13.12□□□□□ -0.31
SMAD3-213ENST00000560175 BPTFQ12830 3046 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 ZNF106Q9H2Y7 1883 aaKnown RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 PIRTP0C851 137 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 GLB1P16278 677 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 BPIP17213 487 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 GEMP55040 296 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 CTBSQ01459 385 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 NR1D2Q14995 579 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 KIF26BQ2KJY2 2108 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms