RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CAPZA3Q96KX2 299 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 C19orf43Q9BQ61 176 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 FRMD8Q9BZ67 464 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 TCEAL2Q9H3H9 227 aaPredicted RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 EIF2B3Q9NR50 452 aaKnown RBP16.74■□□□□ 0.27
RPL28-209ENST00000560055 PCOLCE2Q9UKZ9 415 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 SLC17A4Q9Y2C5 497 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 BTBD3Q9Y2F9 522 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 ARL5AQ9Y689 179 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 DGKBQ9Y6T7 804 aa16.74■□□□□ 0.27
RPL28-209ENST00000560055 LRP4O75096 1905 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 H3BM21 787 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 PDE2AO00408 941 aaPredicted RBP16.73■□□□□ 0.27
RPL28-209ENST00000560055 PPFIA2O75334 1257 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 CEACAM5P06731 702 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 APRTP07741 180 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 ADRB1P08588 477 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 GIMD1P0DJR0 217 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 ZNF140P52738 457 aaPredicted RBP16.73■□□□□ 0.27
RPL28-209ENST00000560055 HK3P52790 923 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 SRP54P61011 504 aaKnown RBP16.73■□□□□ 0.27
RPL28-209ENST00000560055 PPARDQ03181 441 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 RBFAQ8N0V3 343 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 TRAM1L1Q8N609 369 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
RPL28-209ENST00000560055 DEFB124Q8NES8 71 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 BTN2A2Q8WVV5 523 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 OR1E3Q8WZA6 343 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 HIC2Q96JB3 615 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 CAMK1GQ96NX5 476 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 ZSCAN5AQ9BUG6 496 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 BPIFA1Q9NP55 256 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 IL26Q9NPH9 171 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 CASS4Q9NQ75 786 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 UCKL1Q9NWZ5 548 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPL28-209ENST00000560055 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 KLQ9UEF7 1012 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 EPG5Q9HCE0 2579 aa16.73■□□□□ 0.27
RPL28-209ENST00000560055 E7EVH7 732 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 GAPDHSO14556 408 aaPredicted RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 LDB2O43679 373 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 BUD23O43709 281 aaKnown RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 KRT14P02533 472 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 FUCA1P04066 466 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 LPOP22079 712 aaPredicted RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 CASQ1P31415 396 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 GRIA1P42261 906 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 MAGEA6P43360 314 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 BLKP51451 505 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 CDH17Q12864 832 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 PTPRCAPQ14761 206 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 ZDHHC20Q5W0Z9 365 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 ALS2CLQ60I27 953 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 OR52K1Q8NGK4 314 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 TSACCQ96A04 125 aaPredicted RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 SCARF2Q96GP6 870 aaPredicted RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 LRRC61Q9BV99 259 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 DDX47Q9H0S4 455 aaKnown RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 MRPL40Q9NQ50 206 aaKnown RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 PIH1D1Q9NWS0 290 aaKnown RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 APOBEC3BQ9UH17 382 aaKnown RBP16.72■□□□□ 0.27
RPL28-209ENST00000560055 PCYOX1Q9UHG3 505 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 PKP3Q9Y446 797 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 KCTD3Q9Y597 815 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
RPL28-209ENST00000560055 TDRD6O60522 2096 aaKnown RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 PRSS38A1L453 326 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 C2orf81A6NN90 581 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 RASGRP1O95267 797 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 KCNK5O95279 499 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 CRTAMO95727 393 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 CEACAM1P13688 526 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 TPH1P17752 444 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 TPSB2P20231 275 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 PSMA3P25788 255 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 SPAM1P38567 509 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 LMAN1P49257 510 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 BASP1P80723 227 aaKnown RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 PDE1BQ01064 536 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 GPS1Q13098 491 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 KCNJ11Q14654 390 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 TRIP13Q15645 432 aaPredicted RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 TPSAB1Q15661 275 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 INAVAQ3KP66 663 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 TRIM74Q86UV6 250 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 HID1Q8IV36 788 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 GRK7Q8WTQ7 553 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 SETD7Q8WTS6 366 aaKnown RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 PTCD2Q8WV60 388 aaKnown RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 SLC13A1Q9BZW2 595 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 SPASTQ9UBP0 616 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 TMPRSS11EQ9UL52 423 aa16.71■□□□□ 0.27
RPL28-209ENST00000560055 OAS3Q9Y6K5 1087 aaKnown RBP16.71■□□□□ 0.27
RPL28-209ENST00000560055 MROH6A6NGR9 719 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms