RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 CSE1LP55060 971 aaKnown RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 SEPT6Q14141 434 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 MAP7D1Q3KQU3 841 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 MROH9Q5TGP6 573 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ERAP2Q6P179 960 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 CRTC1Q6UUV9 634 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 DPPA4Q7L190 304 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 TSPAN33Q86UF1 283 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 MGARPQ8TDB4 240 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ACMSDQ8TDX5 336 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 PEX13Q92968 403 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ISL2Q96A47 359 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ZNF317Q96PQ6 595 aaPredicted RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 KLF6Q99612 283 aaPredicted RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 RBBP8Q99708 897 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 CYP8B1Q9UNU6 501 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 PLXND1Q9Y4D7 1925 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 A0A0U1RQS6 177 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 C10orf142B7Z368 130 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 TM9SF1O15321 606 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 VAPBO95292 243 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ITGA2BP08514 1039 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 CYP2A6P11509 494 aaPredicted RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 NFKBIAP25963 317 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 VIPR1P32241 457 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ACSL1P33121 698 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 SEC24CP53992 1094 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ACVR1Q04771 509 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 ELP6Q0PNE2 266 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 LRRC14Q15048 493 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 TMEM52BQ4KMG9 183 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 STRA8Q7Z7C7 330 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 FAM124AQ86V42 546 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 FRMD1Q8N878 549 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 BLOC1S5Q8TDH9 187 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 APOPT1Q96IL0 206 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 SGK2Q9HBY8 427 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 IARS2Q9NSE4 1012 aaKnown RBP16.5■□□□□ 0.23
TPM1-219ENST00000559397 TXNDC16Q9P2K2 825 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 FBXO4Q9UKT5 387 aa16.5■□□□□ 0.23
TPM1-219ENST00000559397 IGHV1OR15-9A0A0B4J2B8 117 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 A8MX80 341 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 AURKAO14965 403 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 PSMA3P25788 255 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 OXTRP30559 389 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 SPRP35270 261 aaPredicted RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 LIMK2P53671 638 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 CBARPQ8N350 705 aaPredicted RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 OR13J1Q8NGT2 312 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 OR14C36Q8NHC7 312 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 RLN3Q8WXF3 142 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 EID2BQ96D98 161 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 SRPK1Q96SB4 655 aaKnown RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 BTBD1Q9H0C5 482 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 WSB2Q9NYS7 404 aaPredicted RBP16.49■□□□□ 0.23
TPM1-219ENST00000559397 HACD3Q9P035 362 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 ZNF711Q9Y462 761 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 LRRK1Q38SD2 2015 aa16.49■□□□□ 0.23
TPM1-219ENST00000559397 H0Y858 1186 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 TSPAN6O43657 245 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 CLDN7O95471 211 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 ALDOAP04075 364 aaKnown RBP16.48■□□□□ 0.23
TPM1-219ENST00000559397 CD6P30203 668 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 MAGEA12P43365 314 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 FNTBP49356 437 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 LRRC66Q68CR7 880 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 LYSMD3Q7Z3D4 306 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 WDR5BQ86VZ2 330 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 TTC30BQ8N4P2 665 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 TCP10LQ8TDR4 215 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 TOE1Q96GM8 510 aaKnown RBP16.48■□□□□ 0.23
TPM1-219ENST00000559397 MLXIPLQ9NP71 852 aa16.48■□□□□ 0.23
TPM1-219ENST00000559397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.48■□□□□ 0.233e-7■■□□□ 13.4
TPM1-219ENST00000559397 C1orf232A0A0U1RR37 186 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 GOLGA8TH3BQL2 631 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 PTSQ03393 145 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 NEPROQ6NW34 567 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 LIPIQ6XZB0 460 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 GLT6D1Q7Z4J2 308 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 FAM160A2Q8N612 972 aaPredicted RBP16.47■□□□□ 0.23
TPM1-219ENST00000559397 BCAS4Q8TDM0 211 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 DYDC1Q8WWB3 177 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 NELL1Q92832 810 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 CHMP6Q96FZ7 201 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 MAGEB18Q96M61 343 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 CCT8L2Q96SF2 557 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 FAM167BQ9BTA0 163 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 WRAP53Q9BUR4 548 aaKnown RBP16.47■□□□□ 0.23
TPM1-219ENST00000559397 ZFYVE1Q9HBF4 777 aa16.47■□□□□ 0.23
TPM1-219ENST00000559397 PREBQ9HCU5 417 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms