RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.53
SMAD3-206ENST00000558739 MAGEH1Q9H213 219 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 SARS2Q9NP81 518 aaKnown RBP11.77□□□□□ -0.53
SMAD3-206ENST00000558739 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 TBC1D29Q9UFV1 150 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 STAP1Q9ULZ2 295 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 PCDHGB7Q9Y5F8 929 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 CSAG2Q9Y5P2 127 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 COPG1Q9Y678 874 aaKnown RBP11.77□□□□□ -0.53
SMAD3-206ENST00000558739 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 TMEM63AO94886 807 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 SOD1P00441 154 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 C9P02748 559 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 FGF5P12034 268 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 RHOQP17081 205 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 ERCC5P28715 1186 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 PTGER4P35408 488 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 PER3P56645 1201 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 PYCR3Q53H96 274 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 SYVN1Q86TM6 617 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 DNAAF5Q86Y56 855 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 ITLN2Q8WWU7 325 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 ILKAPQ9H0C8 392 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 SYNCQ9H7C4 482 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 ZBTB20Q9HC78 741 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-206ENST00000558739 OR12D3Q9UGF7 316 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
SMAD3-206ENST00000558739 DOCK10Q96BY6 2186 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 SSU72P8A0A1W2PR75 194 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 CFAP69A5D8W1 941 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 MASP2O00187 686 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 MYL1P05976 194 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 CA5AP35218 305 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 PRCPP42785 496 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 EPHA4P54764 986 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 PPP1CAP62136 330 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 IL11RAQ14626 422 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 LLGL1Q15334 1064 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 KYNUQ16719 465 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 FAM102AQ5T9C2 384 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 RAET1GQ6H3X3 334 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 CERS6Q6ZMG9 384 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 HSD11B1LQ7Z5J1 315 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 NXPE1Q8N323 547 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 HCAR2Q8TDS4 363 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 RSC1A1Q92681 617 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 ECHDC3Q96DC8 303 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 DTD2Q96FN9 168 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 ZNF641Q96N77 438 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 UBE2TQ9NPD8 197 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 USP25Q9UHP3 1055 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 AJAP1Q9UKB5 411 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 KCNK6Q9Y257 313 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 SLC30A1Q9Y6M5 507 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 CCDC88CQ9P219 2028 aa11.75□□□□□ -0.53
SMAD3-206ENST00000558739 FBN1P35555 2871 aaKnown RBP11.75□□□□□ -0.53
SMAD3-206ENST00000558739 MXRA5Q9NR99 2828 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-206ENST00000558739 RASA4BC9J798 803 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 PMM2O15305 246 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 RASA4O43374 803 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 RASSF9O75901 435 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 F9P00740 461 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-206ENST00000558739 COX6B1P14854 86 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 LPOP22079 712 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-206ENST00000558739 LHCGRP22888 699 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 USP8P40818 1118 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 ATP11AP98196 1134 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 ATP1A4Q13733 1029 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 INO80DQ53TQ3 878 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-206ENST00000558739 HGSNATQ68CP4 663 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 KCNMB4Q86W47 210 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 PPP1R3BQ86XI6 285 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 PLXDC1Q8IUK5 500 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 CBARPQ8N350 705 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-206ENST00000558739 CCDC185Q8N715 623 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 EMC1Q8N766 993 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 GPR87Q9BY21 358 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 PDFQ9HBH1 243 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 CD84Q9UIB8 345 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 HPSEQ9Y251 543 aa11.74□□□□□ -0.53
SMAD3-206ENST00000558739 HRNRQ86YZ3 2850 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GOLGA8SH3BPF8 625 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 J3KR12 359 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 SNX2O60749 519 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 FOLR1P15328 257 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 HTR1EP28566 365 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GLRBP48167 497 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 NDUFA8P51970 172 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms