RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 INMTO95050 263 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 MED26O95402 600 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 YES1P07947 543 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 PCNAP12004 261 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 POLR2CP19387 275 aaPredicted RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 GMPRP36959 345 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 NKX2-5P52952 324 aaPredicted RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 SOX10P56693 466 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 POU4F1Q01851 419 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 TRAF3Q13114 568 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 SLC13A2Q13183 592 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 POU6F1Q14863 301 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 FAM83EQ2M2I3 478 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CDONQ4KMG0 1287 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 AGAP9Q5VTM2 703 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 ZNF470Q6ECI4 717 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CCBE1Q6UXH8 406 aaPredicted RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 ZNF598Q86UK7 904 aaKnown RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CCDC117Q8IWD4 279 aaPredicted RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 GALNT12Q8IXK2 581 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 EXOC8Q8IYI6 725 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 UBQLNLQ8IYU4 475 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CCDC185Q8N715 623 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 GABPB2Q8TAK5 448 aaPredicted RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 TWNKQ96RR1 684 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CCDC32Q9BV29 185 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 TOR3AQ9H497 397 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CHRAC1Q9NRG0 131 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 IARS2Q9NSE4 1012 aaKnown RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 RAPGEFL1Q9UHV5 662 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 TRHDEQ9UKU6 1024 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 INTS6Q9UL03 887 aaKnown RBP16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
HMBOX1-212ENST00000558662 CCDC154A6NI56 674 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 UPK1AO00322 258 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 NR5A2O00482 541 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 POLR1CO15160 346 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 SHOXO15266 292 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 NCAM2O15394 837 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 MFN2O95140 757 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 FGF4P08620 206 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 HDCP19113 662 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 HTR3AP46098 478 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 AP2S1P53680 142 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 EMX1Q04741 257 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 KIF19Q2TAC6 998 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 ZNF691Q5VV52 312 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 BSPRYQ5W0U4 402 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 ELMOD2Q8IZ81 293 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 BIRC7Q96CA5 298 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 NXNL1Q96CM4 212 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 LGALS12Q96DT0 336 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 C19orf60Q96EN9 201 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 NSMCE2Q96MF7 247 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 C11orf84Q9BUA3 381 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 TRAF4Q9BUZ4 470 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 KIFC1Q9BW19 673 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 MKRN2Q9H000 416 aaKnown RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 OSBPL2Q9H1P3 480 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 NTN4Q9HB63 628 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 SDR39U1Q9NRG7 319 aaPredicted RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 SCN3BQ9NY72 215 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 CCDC59Q9P031 241 aaKnown RBP16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 DNAJB9Q9UBS3 223 aa16.14■□□□□ 0.17
HMBOX1-212ENST00000558662 A0A1W2PP18 115 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 XYLBO75191 536 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 HOXC6P09630 235 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 S100A5P33763 92 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 OR2B6P58173 313 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 LIPEQ05469 1076 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 CD47Q08722 323 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 TARDBPQ13148 414 aaKnown RBP eCLIP16.13■□□□□ 0.173e-8■■■■□ 26.3
HMBOX1-212ENST00000558662 NPTX1Q15818 432 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 CEP78Q5JTW2 689 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 UBE2UQ5VVX9 321 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 KCTD11Q693B1 232 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 BLOC1S3Q6QNY0 202 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 ZNF567Q8N184 647 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 OR52K1Q8NGK4 314 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 BLOC1S5Q8TDH9 187 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 JPH3Q8WXH2 748 aaPredicted RBP16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 TMBIM1Q969X1 311 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 ZHX1-C8orf76Q96EF9 292 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 L3HYPDHQ96EM0 354 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 VAT1Q99536 393 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 TMEM246Q9BRR3 403 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 SLC39A3Q9BRY0 314 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 ZBED2Q9BTP6 218 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 UGT2B28Q9BY64 529 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 DUSP21Q9H596 190 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 POLE4Q9NR33 117 aa16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 DDX28Q9NUL7 540 aaKnown RBP16.13■□□□□ 0.17
HMBOX1-212ENST00000558662 PEX16Q9Y5Y5 336 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms