RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 LPAR3Q9UBY5 353 aa3.31□□□□□ -1.88
HERC1-203ENST00000558532 HAO1Q9UJM8 370 aa3.31□□□□□ -1.88
HERC1-203ENST00000558532 AMFRQ9UKV5 643 aa3.31□□□□□ -1.88
HERC1-203ENST00000558532 TNFRSF18Q9Y5U5 241 aa3.31□□□□□ -1.88
HERC1-203ENST00000558532 SNX13Q9Y5W8 968 aa3.31□□□□□ -1.88
HERC1-203ENST00000558532 BAZ2AQ9UIF9 1905 aaKnown RBP3.31□□□□□ -1.88
HERC1-203ENST00000558532 ARFGEF1Q9Y6D6 1849 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PHLPP1O60346 1717 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PLIN4Q96Q06 1357 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SPATA31A5Q5VU36 1347 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SPATA31A7Q8IWB4 1347 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TCRBV5S1A1TA0A578 114 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 ESYT2A0FGR8 921 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SH3PXD2BA1X283 911 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 HTR3EA5X5Y0 456 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 AQP7P3A6NL99 342 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 EIF4E1BA6NMX2 242 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 PP2D1A8MPX8 630 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TMEM110-MUSTN1A8MSY1 372 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RHPN2P1A8MT19 583 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 H0Y3Z8 333 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 M0R3H8 397 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 HNRNPRO43390 633 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 RGS10O43665 173 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TYROBPO43914 113 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 EXOC3O60645 756 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PFDN1O60925 122 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RNASEH1O60930 286 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 CBFA2T3O75081 653 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FKBP6O75344 327 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PRDM1O75626 825 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SERPINB7O75635 380 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TFAP2AP05549 437 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 ANXA2P07355 339 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 OR52Z1P0C646 297 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 DHRS4L1P0CG22 281 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TROVE2P10155 538 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERC1-203ENST00000558532 CETPP11597 493 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 UQCRBP14927 111 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 ANPEPP15144 967 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 UCHL3P15374 230 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PHKG2P15735 406 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TSHRP16473 764 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TPH1P17752 444 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SERPINB3P29508 390 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 MAN1A1P33908 653 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 HOXD12P35452 270 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RPL5P46777 297 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 DIO1P49895 249 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CASP5P51878 434 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PGDP52209 483 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PLTPP55058 493 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 POLR2FP61218 127 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 TUBA4AP68366 448 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 ASIC1P78348 528 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PDE1BQ01064 536 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SRSF4Q08170 494 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 ZNF543Q08ER8 600 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 LMAN2Q12907 356 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 MSLNQ13421 630 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 PTK6Q13882 451 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CYLC2Q14093 348 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 DLGAP5Q15398 846 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CCDC6Q16204 474 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NFIL3Q16649 462 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 KYNUQ16719 465 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 LONRF1Q17RB8 773 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CERKLQ49MI3 558 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 ANKRD20A4Q4UJ75 823 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CCDC92Q53HC0 331 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 MAP3K21Q5TCX8 1036 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 MANEALQ5VSG8 457 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NEPROQ6NW34 567 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TTC27Q6P3X3 843 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 IZUMO2Q6UXV1 221 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RINLQ6ZS11 566 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PIK3AP1Q6ZUJ8 805 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 PTCHD4Q6ZW05 846 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NLRP9Q7RTR0 991 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 OTOAQ7RTW8 1153 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 TMEM110Q86TL2 294 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 TMEM126BQ8IUX1 230 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CROCCP3Q8IVE0 287 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CCDC65Q8IXS2 484 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 ARHGAP24Q8N264 748 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 METTL25Q8N6Q8 603 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SIRT6Q8N6T7 355 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 LINC01465Q8N7H1 131 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 RNF152Q8N8N0 203 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 FAM133AQ8N9E0 248 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 NGDNQ8NEJ9 315 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 OR6Y1Q8NGX8 325 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 LNX1Q8TBB1 728 aaPredicted RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 DQX1Q8TE96 717 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 TRPC4APQ8TEL6 797 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 SNRNP27Q8WVK2 155 aaKnown RBP3.3□□□□□ -1.88
HERC1-203ENST00000558532 SCFD1Q8WVM8 642 aa3.3□□□□□ -1.88
HERC1-203ENST00000558532 CTNNBL1Q8WYA6 563 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms