RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 TSPAN33Q86UF1 283 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 SSC4DQ8WTU2 575 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 PDCD6IPQ8WUM4 868 aaKnown RBP18.21■□□□□ 0.51
ABCD4-228ENST00000557588 SCRN2Q96FV2 425 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 NUDCD1Q96RS6 583 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 ULBP3Q9BZM4 244 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 EPB41L1Q9H4G0 881 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 STN1Q9H668 368 aaKnown RBP18.21■□□□□ 0.51
ABCD4-228ENST00000557588 TMEM98Q9Y2Y6 226 aa18.21■□□□□ 0.51
ABCD4-228ENST00000557588 TTC24A2A3L6 582 aaPredicted RBP18.2■□□□□ 0.5
ABCD4-228ENST00000557588 FURINP09958 794 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 DESP17661 470 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 ERCC2P18074 760 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 TNFAIP3P21580 790 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 DLSTP36957 453 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 POLR2FP61218 127 aaKnown RBP18.2■□□□□ 0.5
ABCD4-228ENST00000557588 OGDHQ02218 1023 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 TRAF2Q12933 501 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 NFATC2Q13469 925 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 CA9Q16790 459 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 USP45Q70EL2 814 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 TRIM74Q86UV6 250 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 LZTR1Q8N653 840 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 FNIP1Q8TF40 1166 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 NCSTNQ92542 709 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 SH3KBP1Q96B97 665 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 DHX35Q9H5Z1 703 aaKnown RBP18.2■□□□□ 0.5
ABCD4-228ENST00000557588 CROTQ9UKG9 612 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 DOPEY1Q5JWR5 2465 aa18.2■□□□□ 0.5
ABCD4-228ENST00000557588 TRBV23OR9-2A0A075B6M9 112 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 A6NCN8 305 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 EPHB6O15197 1021 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 PDGFAP04085 211 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 PYGLP06737 847 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 ZNF28P17035 718 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 EEF1GP26641 437 aaKnown RBP18.19■□□□□ 0.5
ABCD4-228ENST00000557588 ZNF235Q14590 738 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 MARK2Q7KZI7 788 aaKnown RBP18.19■□□□□ 0.5
ABCD4-228ENST00000557588 ZNF765Q7L2R6 523 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 PGBD5Q8N414 524 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 EFCAB3Q8N7B9 438 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 AP2M1Q96CW1 435 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 COX14Q96I36 57 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 MGME1Q9BQP7 344 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 ABCG8Q9H221 673 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 NOD2Q9HC29 1040 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 CUEDC1Q9NWM3 386 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-228ENST00000557588 CD84Q9UIB8 345 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 TLK1Q9UKI8 766 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 PPIL1Q9Y3C6 166 aa18.19■□□□□ 0.5
ABCD4-228ENST00000557588 ABCA12Q86UK0 2595 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 DAPK3O43293 454 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 PGLSO95336 258 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 PEX11BO96011 259 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 RNF224P0DH78 156 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 KLK7P49862 253 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 ERV3-1Q14264 604 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 PTPRRQ15256 657 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 DPCR1Q3MIW9 517 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 TCP11X2Q5H9J9 407 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 RALGPS1Q5JS13 557 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 DCUN1D2Q6PH85 259 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 IYDQ6PHW0 289 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 C6orf15Q6UXA7 325 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 RFLNAQ6ZTI6 216 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 NLRP8Q86W28 1048 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 APLFQ8IW19 511 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 CPT1CQ8TCG5 803 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 KCTD15Q96SI1 283 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 HERPUD2Q9BSE4 406 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 SNRNP25Q9BV90 132 aaKnown RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 NLRC4Q9NPP4 1024 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 FAM207AQ9NSI2 230 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 VPS18Q9P253 973 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 TBC1D29Q9UFV1 150 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 KLHL3Q9UH77 587 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 PCDHGA6Q9Y5G7 932 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 PCYT1BQ9Y5K3 369 aaPredicted RBP18.18■□□□□ 0.5
ABCD4-228ENST00000557588 SHANK1Q9Y566 2161 aa18.18■□□□□ 0.5
ABCD4-228ENST00000557588 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 LILRA5A6NI73 299 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 TTLL8A6PVC2 850 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 DNAJC6O75061 913 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 RECKO95980 971 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 C9P02748 559 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 SLC2A4P14672 509 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 MAPK9P45984 424 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 LRRC66Q68CR7 880 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 TMEM135Q86UB9 458 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 SCAMP4Q969E2 229 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 PEBP4Q96S96 227 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 SAMSN1Q9NSI8 373 aaKnown RBP18.17■□□□□ 0.5
ABCD4-228ENST00000557588 TAB2Q9NYJ8 693 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 KCND3Q9UK17 655 aa18.17■□□□□ 0.5
ABCD4-228ENST00000557588 OAS3Q9Y6K5 1087 aaKnown RBP18.17■□□□□ 0.5
ABCD4-228ENST00000557588 KIR2DS5A0A0G2JLQ3 304 aa18.16■□□□□ 0.5
ABCD4-228ENST00000557588 A0A0G2JNG1 304 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms