RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
PSEN1-221ENST00000557293 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 SCYL2Q6P3W7 929 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
PSEN1-221ENST00000557293 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 TSPAN33Q86UF1 283 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 Q8NA96 180 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 ULBP3Q9BZM4 244 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 GPATCH2LQ9NWQ4 482 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 TBC1D29Q9UFV1 150 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 PPIL1Q9Y3C6 166 aa12.45□□□□□ -0.42
PSEN1-221ENST00000557293 ZNF106Q9H2Y7 1883 aaKnown RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 PIPSLA2A3N6 862 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SIGLEC16A6NMB1 481 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 FGF10O15520 208 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 DNAJC6O75061 913 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 UCHL3P15374 230 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 MTIF2P46199 727 aaKnown RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 EPHA4P54764 986 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 GFERP55789 205 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 AP1S1P61966 158 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 CDR2Q01850 454 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SLC10A7Q0GE19 358 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 MAN2A1Q16706 1144 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 CA9Q16790 459 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 NLRP8Q86W28 1048 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 PGBD5Q8N414 524 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SCAMP4Q969E2 229 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SCRN2Q96FV2 425 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 COX14Q96I36 57 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 C9orf72Q96LT7 481 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 MCCC1Q96RQ3 725 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 STK33Q9BYT3 514 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 TWSG1Q9GZX9 223 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 RCOR3Q9P2K3 495 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-221ENST00000557293 PRKAB1Q9Y478 270 aa12.44□□□□□ -0.42
PSEN1-221ENST00000557293 FBN2P35556 2912 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 ARHGAP42A6NI28 874 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 F8VZ95 297 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 PSMD11O00231 422 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 SPAG6O75602 509 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 PEX11BO96011 259 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 GPR1P46091 355 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 FOXM1Q08050 763 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 IL10RBQ08334 325 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 TRAF2Q12933 501 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 DNASE1L3Q13609 305 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 LRP8Q14114 963 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 RFTN1Q14699 578 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 VWA3BQ502W6 1294 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 CPZQ66K79 652 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 NPWQ8N729 165 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 ZNF768Q9H5H4 540 aaKnown RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 DONSONQ9NYP3 566 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 CD84Q9UIB8 345 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 KCND3Q9UK17 655 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 CNOT6Q9ULM6 557 aaKnown RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 PHTF1Q9UMS5 762 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 PCDHGA9Q9Y5G4 932 aaKnown RBP12.43□□□□□ -0.42
PSEN1-221ENST00000557293 SLC30A1Q9Y6M5 507 aa12.43□□□□□ -0.42
PSEN1-221ENST00000557293 GFPT2O94808 682 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 NDUFA10O95299 355 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 TIAF1O95411 115 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 CPP00450 1065 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 FGF5P12034 268 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 ELAVL4P26378 380 aaKnown RBP12.42□□□□□ -0.42
PSEN1-221ENST00000557293 MAPK9P45984 424 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 PPM1FP49593 454 aaPredicted RBP12.42□□□□□ -0.42
PSEN1-221ENST00000557293 TPI1P60174 286 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 OGDHQ02218 1023 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 PTSQ03393 145 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 CHAF1BQ13112 559 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 PIH1D2Q8WWB5 315 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 SH3KBP1Q96B97 665 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 OR6C1Q96RD1 312 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 WDR24Q96S15 920 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 ZMYND15Q9H091 742 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 NOD2Q9HC29 1040 aa12.42□□□□□ -0.42
PSEN1-221ENST00000557293 LHX9Q9NQ69 397 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms