RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ANAPC4Q9UJX5 808 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 PCDHA12Q9UN75 941 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 MTCH2Q9Y6C9 303 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 ASTN1O14525 1302 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 GRIN2DO15399 1336 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 LTBP2Q14767 1821 aa5.37□□□□□ -1.55
HIF1A-209ENST00000556827 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TMEM272A0A1B0GTI8 110 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 FAM90A8PA6NJQ4 464 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 PEX12O00623 359 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 NMT2O60551 498 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SYF2O95926 243 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 GH1P01241 217 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 PYGLP06737 847 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 FAM90A13PP0C7W8 464 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 FAM90A24PP0C7X0 464 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 PCP11498 1178 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 THBS3P49746 956 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 NT5C2P49902 561 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 CCR5P51681 352 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TRAF1Q13077 416 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 EFR3AQ14156 821 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 IL13RA2Q14627 380 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 ANKRD1Q15327 319 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 INPP5JQ15735 1006 aaPredicted RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 ODF3L2Q3SX64 289 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 PLK5Q496M5 336 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 C5orf22Q49AR2 442 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 FBXO43Q4G163 708 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 NAPEPLDQ6IQ20 393 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SEPT14Q6ZU15 432 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 CHST3Q7LGC8 479 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 LRRTM4Q86VH4 590 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 IQCA1Q86XH1 822 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TICAM2Q86XR7 235 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SMAP1Q8IYB5 467 aaPredicted RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 ESR2Q92731 530 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TGS1Q96RS0 853 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 IWS1Q96ST2 819 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SEC62Q99442 399 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 RAD9AQ99638 391 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TMEM47Q9BQJ4 181 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 WDR83Q9BRX9 315 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 CADM1Q9BY67 442 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 STN1Q9H668 368 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 KAT14Q9H8E8 782 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 SEMA4BQ9NPR2 832 aaPredicted RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 TCP11L1Q9NUJ3 509 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 WWOXQ9NZC7 414 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 PLEKHB1Q9UF11 243 aaPredicted RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 MRPL11Q9Y3B7 192 aaKnown RBP5.36□□□□□ -1.55
HIF1A-209ENST00000556827 A0A0G2JMZ2 1700 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 NAV1Q8NEY1 1877 aa5.36□□□□□ -1.55
HIF1A-209ENST00000556827 COL6A3P12111 3177 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 TTC3P53804 2025 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 RLFQ13129 1914 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ABCB11O95342 1321 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 TRBV5-7A0A0A0MS05 114 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 RRN3P2A6NIE6 340 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 CCNT1O60563 726 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 CBX6O95503 412 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 METTL18O95568 372 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 FGF2P09038 288 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 TNFRSF1BP20333 461 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 MTNR1AP48039 350 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 TMPRSS3P57727 454 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 RPS6P62753 249 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ALX1Q15699 326 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 USH1GQ495M9 461 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 MCMDC2Q4G0Z9 681 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ALG10Q5BKT4 473 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ALG10BQ5I7T1 473 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 MANEAQ5SRI9 462 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 UBAP2Q5T6F2 1119 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ARHGEF16Q5VV41 709 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 DENND1BQ6P3S1 775 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ZNF549Q6P9A3 640 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 LRRC8DQ7L1W4 858 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 SLC25A28Q96A46 364 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 MAELQ96JY0 434 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 LYZL4Q96KX0 146 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 UPF3BQ9BZI7 483 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 CD207Q9UJ71 328 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 MTUS1Q9ULD2 1270 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 ICKQ9UPZ9 632 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 DDX49Q9Y6V7 483 aaKnown RBP5.35□□□□□ -1.55
HIF1A-209ENST00000556827 A0A0C4DFX4 3053 aa5.35□□□□□ -1.55
HIF1A-209ENST00000556827 SAC3D1A6NKF1 404 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 EPN2O95208 641 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 GJB5O95377 273 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 HLA-DQA2P01906 255 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 MMP3P08254 477 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 WEE2P0C1S8 567 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 HSPD1P10809 573 aaKnown RBP5.34□□□□□ -1.55
HIF1A-209ENST00000556827 PDHBP11177 359 aa5.34□□□□□ -1.55
HIF1A-209ENST00000556827 KCNA5P22460 613 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms