RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ETV5P41161 510 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 MAPK10P53779 464 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 CCDC13Q8IYE1 715 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 NAGSQ8N159 534 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 LPCAT1Q8NF37 534 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 OR8K1Q8NGG5 319 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 EXD1Q8NHP7 514 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 RAPGEF5Q92565 580 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 USP7Q93009 1102 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 DEF6Q9H4E7 631 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 AKAP7Q9P0M2 348 aaPredicted RBP22.48■■□□□ 1.19
ACTN1-220ENST00000556433 PRAMEF33A0A0G2JMD5 474 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 INPP4BO15327 924 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 EFSO43281 561 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 PRAMEF10O60809 474 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 ASMTLO95671 621 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 JCHAINP01591 159 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 CD1CP29017 333 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 GPR3P46089 330 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 RPL26P61254 145 aaKnown RBP22.47■■□□□ 1.19
ACTN1-220ENST00000556433 MESDQ14696 234 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 NR1D2Q14995 579 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 C16orf72Q14CZ0 275 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 CLPPQ16740 277 aaPredicted RBP22.47■■□□□ 1.19
ACTN1-220ENST00000556433 ASTE1Q2TB18 679 aaPredicted RBP22.47■■□□□ 1.19
ACTN1-220ENST00000556433 PYCR3Q53H96 274 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF574Q6ZN55 896 aaPredicted RBP22.47■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF605Q86T29 641 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 RNF157Q96PX1 679 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 NUDT22Q9BRQ3 303 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 DTLQ9NZJ0 730 aa22.47■■□□□ 1.19
ACTN1-220ENST00000556433 RPL26L1Q9UNX3 145 aaKnown RBP22.47■■□□□ 1.19
ACTN1-220ENST00000556433 PPM1DO15297 605 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 MAN1A1P33908 653 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 LY6DQ14210 128 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 GALNT13Q8IUC8 556 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 RAVER1Q8IY67 606 aaKnown RBP22.46■■□□□ 1.19
ACTN1-220ENST00000556433 HDAC11Q96DB2 347 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 COX14Q96I36 57 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF830Q96NB3 372 aaPredicted RBP22.46■■□□□ 1.19
ACTN1-220ENST00000556433 LYSMD1Q96S90 227 aa22.46■■□□□ 1.19
ACTN1-220ENST00000556433 ZNHIT6Q9NWK9 470 aaKnown RBP22.46■■□□□ 1.19
ACTN1-220ENST00000556433 TRBV23OR9-2A0A075B6M9 112 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 KCNK1O00180 336 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 AKR1B10O60218 316 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 TMEM253P0C7T8 217 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 LIPCP11150 499 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 CD86P42081 329 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 QPCTQ16769 361 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 NKAIN2Q5VXU1 208 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 ZFAND4Q86XD8 727 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 SLC35G2Q8TBE7 412 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 DNAJC7Q99615 494 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 MLPHQ9BV36 600 aaPredicted RBP22.45■■□□□ 1.18
ACTN1-220ENST00000556433 FOXJ2Q9P0K8 574 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 ZNHIT2Q9UHR6 403 aa22.45■■□□□ 1.18
ACTN1-220ENST00000556433 IGHV5-10-1A0A0J9YXX1 117 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 C1orf232A0A0U1RR37 186 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 SSU72P8A0A1W2PR75 194 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 LRRD1A4D1F6 860 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 C9orf172C9J069 976 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 MMP2P08253 660 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 CCL4P13236 92 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 TMEM164Q5U3C3 297 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 RCBTB1Q8NDN9 531 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 WDR24Q96S15 920 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 SEMA4CQ9C0C4 833 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 FAM83DQ9H4H8 585 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 SEPT10Q9P0V9 454 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 CNOT6Q9ULM6 557 aaKnown RBP22.44■■□□□ 1.18
ACTN1-220ENST00000556433 PCDHB11Q9Y5F2 797 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 HEY1Q9Y5J3 304 aa22.44■■□□□ 1.18
ACTN1-220ENST00000556433 ANKRD66B4E2M5 251 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 HGSO14964 777 aaPredicted RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 CBFA2T2O43439 604 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 ATP1A1P05023 1023 aaKnown RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 SPINT3P49223 89 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 LIMK2P53671 638 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 PPIDQ08752 370 aaKnown RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 SRSF6Q13247 344 aaKnown RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 LRP8Q14114 963 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 TRIM14Q14142 442 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 PLD5Q8N7P1 536 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 CNTD1Q8N815 330 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 CCHCR1Q8TD31 782 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 CCDC74BQ96LY2 380 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 MAK16Q9BXY0 300 aaKnown RBP22.43■■□□□ 1.18
ACTN1-220ENST00000556433 ADGRE3Q9BY15 652 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 KCNK4Q9NYG8 393 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 PKD2L2Q9NZM6 624 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 PRKAB1Q9Y478 270 aa22.43■■□□□ 1.18
ACTN1-220ENST00000556433 SCN8AQ9UQD0 1980 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 IGHV1OR21-1A0A087WYE8 117 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 PLA2G2AP14555 144 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 PTMSP20962 102 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 IFI35P80217 286 aaPredicted RBP22.42■■□□□ 1.18
ACTN1-220ENST00000556433 ZBTB17Q13105 803 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 SQSTM1Q13501 440 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 MANEAQ5SRI9 462 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms