RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RAB2BQ8WUD1 216 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 NTAN1Q96AB6 310 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARMC7Q9H6L4 198 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 RPS6KA6Q9UK32 745 aa14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 SAMHD1Q9Y3Z3 626 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-207ENST00000556399 CLDN25C9JDP6 229 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 DENRO43583 198 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 COX7A2P14406 83 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UGT1A6P19224 532 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UGT1A1P22309 533 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UGT1A4P22310 534 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UGT1A3P35503 534 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UGT1A5P35504 534 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 TUBA4AP68366 448 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 C1DQ13901 141 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 PAFAH1B3Q15102 231 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 GALNT5Q7Z7M9 940 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 C12orf43Q96C57 262 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 FCRL5Q96RD9 977 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MOSPD1Q9UJG1 213 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ASB3Q9Y575 518 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MYBPHLA2RUH7 354 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZNF487B1APH4 448 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC28A1O00337 649 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 RNASEH2AO75792 299 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARIH2O95376 493 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 LPOP22079 712 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 BOP1Q14137 746 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 INTS11Q5TA45 600 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 AKTIPQ9H8T0 292 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 PRDM5Q9NQX1 630 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZNHIT2Q9UHR6 403 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 PDE10AQ9Y233 779 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MOXD2PA6NHM9 499 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARPC2O15144 300 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 HTRA2O43464 458 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 TULP3O75386 442 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 RGS20O76081 388 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 FADS2O95864 444 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 WARSP23381 471 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 RPL9P32969 192 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 SIM2Q14190 667 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 UTS2BQ765I0 119 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 C16orf59Q7L2K0 433 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ERMP1Q7Z2K6 904 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 GPC2Q8N158 579 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 CRYBG2Q8N1P7 616 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MCFD2Q8NI22 146 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 GPR21Q99679 349 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC39A8Q9C0K1 460 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 EHD3Q9NZN3 535 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 BTBD3Q9Y2F9 522 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 PCDHB7Q9Y5E2 793 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 H7C4K7 107 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 SH3BGRLO75368 114 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MC4RP32245 332 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 MTA1Q13330 715 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 FAM171A1Q5VUB5 890 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 RPS27LQ71UM5 84 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ADCK2Q7Z695 626 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 ZFP28Q8NHY6 868 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 NODALQ96S42 347 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 TSEN34Q9BSV6 310 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 CCNB1IP1Q9NPC3 277 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 H2AFY2Q9P0M6 372 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 IKZF3Q9UKT9 509 aa14.97□□□□□ -0.01
ARHGEF40-207ENST00000556399 SMIM35A0A1B0GVV1 85 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 BCKDKO14874 412 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 INAQ16352 499 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 CLEC20AQ6ZU45 233 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 CYS1Q717R9 158 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 OR4K2Q8NGD2 314 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 STYXQ8WUJ0 223 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 TMEM245Q9H330 911 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 HIPK3Q9H422 1215 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC2A6Q9UGQ3 507 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 A8MX80 341 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ANXA5P08758 320 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 UROSP10746 265 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 NCF4Q15080 339 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 HFE2Q6ZVN8 426 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 IRGQQ8WZA9 623 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 LRRC58Q96CX6 371 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 HBEGFQ99075 208 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ADAM2Q99965 735 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 INTS10Q9NVR2 710 aaKnown RBP14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 SLC7A4O43246 635 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 GOT2P00505 430 aaKnown RBP14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 NTRK1P04629 796 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 MMP3P08254 477 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 CYP2A7P20853 494 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 RXRGP48443 463 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 HERVK_113P63132 956 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 NIPAL4Q0D2K0 466 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARMC12Q5T9G4 340 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 ARFGAP1Q8N6T3 406 aa14.96□□□□□ -0.01
ARHGEF40-207ENST00000556399 CLHC1Q8NHS4 586 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms