RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SPINT3P49223 89 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 DUSP3P51452 185 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 WNT3AP56704 352 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 C1orf61Q13536 156 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 LVRNQ6Q4G3 990 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 UNQ6494/PRO21346Q6UXR6 183 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 PID1Q7Z2X4 250 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 RD3Q7Z3Z2 195 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 KDELC2Q7Z4H8 507 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 GKN2Q86XP6 184 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 GLMNQ92990 594 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 SCAMP4Q969E2 229 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 OXNAD1Q96HP4 312 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 BOCQ9BWV1 1114 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 GBA3Q9H227 469 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 MAGEE1Q9HCI5 957 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 UBP1Q9NZI7 540 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 NFKBIL1Q9UBC1 381 aaPredicted RBP11.49□□□□□ -0.57
SLIRP-205ENST00000556310 RSPH14Q9UHP6 348 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 ZNF711Q9Y462 761 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 ASXL3Q9C0F0 2248 aa11.49□□□□□ -0.57
SLIRP-205ENST00000556310 ARHGEF17Q96PE2 2063 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 RP1P56715 2156 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 KNTC1P50748 2209 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 WDFY3Q8IZQ1 3526 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 LOC285095A0A1B0GVY8 99 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 YY2O15391 372 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 KCNN4O15554 427 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 EPOP01588 193 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 CEACAM5P06731 702 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 GP1BAP07359 652 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 PIRTP0C851 137 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 TNNT3P45378 269 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 RPIAP49247 311 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 DCDC1P59894 354 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 MPP3Q13368 585 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 HENMT1Q5T8I9 393 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 DARS2Q6PI48 645 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 TMPRSS12Q86WS5 348 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 SLC35F3Q8IY50 421 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 SCG3Q8WXD2 468 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 SPATA13Q96N96 652 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 ALS2CR12Q96Q35 445 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 FAM118BQ9BPY3 351 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 RIOK2Q9BVS4 552 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 CDH19Q9H159 772 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 C10orf88Q9H8K7 445 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 ZFYVE1Q9HBF4 777 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 CYP4F12Q9HCS2 524 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 MRPL40Q9NQ50 206 aaKnown RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 DOLKQ9UPQ8 538 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 SLC17A4Q9Y2C5 497 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 COL27A1Q8IZC6 1860 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
SLIRP-205ENST00000556310 FREM2Q5SZK8 3169 aa11.48□□□□□ -0.57
SLIRP-205ENST00000556310 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 F5H423 210 aaPredicted RBP11.47□□□□□ -0.57
SLIRP-205ENST00000556310 ANXA9O76027 345 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 SLC4A1P02730 911 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 FGF1P05230 155 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 IVLP07476 585 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 C1QTNF9P0C862 333 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 MYF5P13349 255 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 GEMP55040 296 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 E2F1Q01094 437 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 NR0B2Q15466 257 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 TCEA2Q15560 299 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 SIRPB2Q5JXA9 342 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 SEL1L2Q5TEA6 688 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 HES3Q5TGS1 186 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 GUSBP11Q6P575 273 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 TMC3Q7Z5M5 1100 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 ARL10Q8N8L6 244 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 IFI44Q8TCB0 444 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 NAT6Q93015 286 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 EID2BQ96D98 161 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 COX14Q96I36 57 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 HIC2Q96JB3 615 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 PPP1R2P1Q96PQ5 205 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 WDR24Q96S15 920 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 AGAP2Q99490 1192 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 GORASP1Q9BQQ3 440 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 FSD1LQ9BXM9 530 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 GPR63Q9BZJ6 419 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 TMEM168Q9H0V1 697 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 FAM83DQ9H4H8 585 aa11.47□□□□□ -0.57
SLIRP-205ENST00000556310 TRABDQ9H4I3 376 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms