RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 FUCA1P04066 466 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 CDK4P11802 303 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 BPIP17213 487 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 GNPDA1P46926 289 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 DUSP3P51452 185 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-217ENST00000556203 DCDC1P59894 354 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 OLIG2Q13516 323 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 NR0B2Q15466 257 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 LVRNQ6Q4G3 990 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 TMPRSS7Q7RTY8 843 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 TAF8Q7Z7C8 310 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 SDR16C5Q8N3Y7 309 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 GPR26Q8NDV2 337 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 CCL4L1Q8NHW4 92 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 C1orf54Q8WWF1 131 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
ACTN1-217ENST00000556203 COX14Q96I36 57 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 PDLIM2Q96JY6 352 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 PPP1R2P1Q96PQ5 205 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 APOL2Q9BQE5 337 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 BOCQ9BWV1 1114 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 SPATA16Q9BXB7 569 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 CDH19Q9H159 772 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 BPIFA1Q9NP55 256 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 RAD18Q9NS91 495 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 NCKIPSDQ9NZQ3 722 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 SIRPGQ9P1W8 387 aa15.1■□□□□ 0.01
ACTN1-217ENST00000556203 CNOT6Q9ULM6 557 aaKnown RBP15.1■□□□□ 0.01
ACTN1-217ENST00000556203 ZSCAN12O43309 604 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 METTL18O95568 372 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 IVLP07476 585 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 ADRA1AP35348 466 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 HMGCLP35914 325 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 CLDN6P56747 220 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 SNX1Q13596 522 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 SPARCL1Q14515 664 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 OASLQ15646 514 aaKnown RBP15.09■□□□□ 0.01
ACTN1-217ENST00000556203 SMAD1Q15797 465 aaKnown RBP15.09■□□□□ 0.01
ACTN1-217ENST00000556203 PARP6Q2NL67 630 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 RANBP10Q6VN20 620 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 MARK2Q7KZI7 788 aaKnown RBP15.09■□□□□ 0.01
ACTN1-217ENST00000556203 GLT6D1Q7Z4J2 308 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 SLC35F3Q8IY50 421 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 GALNT15Q8N3T1 639 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 TTC30BQ8N4P2 665 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 TRAM1L1Q8N609 369 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 GLMNQ92990 594 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 HACD3Q9P035 362 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 NFKBIL1Q9UBC1 381 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-217ENST00000556203 GULP1Q9UBP9 304 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 GPR34Q9UPC5 381 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 MSRB2Q9Y3D2 182 aa15.09■□□□□ 0.01
ACTN1-217ENST00000556203 CPED1A4D0V7 1026 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 FAM149AA5PLN7 773 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 FAM221BA6H8Z2 402 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 CEP104O60308 925 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 USP12O75317 370 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 ASMTLO95671 621 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 FGGP02679 453 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 ATP1A1P05023 1023 aaKnown RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 CXCR5P32302 372 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 RPIAP49247 311 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 SIX1Q15475 284 aaPredicted RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 P3H1Q32P28 736 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 ZNF569Q5MCW4 686 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 GUSBP11Q6P575 273 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 MARCH9Q86YJ5 346 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 TAB3Q8N5C8 712 aaPredicted RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 ARL10Q8N8L6 244 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 KYQ8NBH2 561 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 IFI44Q8TCB0 444 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 GPBAR1Q8TDU6 330 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 RTP4Q96DX8 246 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 SCARF2Q96GP6 870 aaPredicted RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 TBL1YQ9BQ87 522 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 ZSCAN5AQ9BUG6 496 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 GSDMCQ9BYG8 508 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 TRNAU1APQ9NX07 287 aaKnown RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 TRMT1Q9NXH9 659 aaKnown RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 ZNF148Q9UQR1 794 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 GPSM3Q9Y4H4 160 aa15.08■□□□□ 0
ACTN1-217ENST00000556203 OAS3Q9Y6K5 1087 aaKnown RBP15.08■□□□□ 0
ACTN1-217ENST00000556203 TDRD6O60522 2096 aaKnown RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 ARID1BQ8NFD5 2236 aaPredicted RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 EME2A4GXA9 379 aaPredicted RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 BUD23O43709 281 aaKnown RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 IFNB1P01574 187 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 GP1BAP07359 652 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 ADCY8P40145 1251 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 E2F1Q01094 437 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 ILF3Q12906 894 aaKnown RBP eCLIP15.07■□□□□ 0
ACTN1-217ENST00000556203 LONRF2Q1L5Z9 754 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 HES3Q5TGS1 186 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 ZDHHC20Q5W0Z9 365 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 KCTD11Q693B1 232 aa15.07■□□□□ 0
ACTN1-217ENST00000556203 CCNI2Q6ZMN8 369 aaPredicted RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 EFL1Q7Z2Z2 1120 aaKnown RBP15.07■□□□□ 0
ACTN1-217ENST00000556203 TMPRSS12Q86WS5 348 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms