RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 MOSPD3O75425 235 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 GJB3O75712 270 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 GOT2P00505 430 aaKnown RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 RBP1P09455 135 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SBK3P0C264 359 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 T-ENOLP0DO92 83 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 MYL2P10916 166 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 LPOP22079 712 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CTNNB1P35222 781 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SOX18P35713 384 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 IRX4P78413 519 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CYP4F8P98187 520 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 IRF9Q00978 393 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 DMC1Q14565 340 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ACAP2Q15057 778 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 TBCCQ15814 346 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 FAM83EQ2M2I3 478 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 HECTD2Q5U5R9 776 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 AGAP9Q5VTM2 703 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 FAM45BPQ6NSW5 357 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 AFTPHQ6ULP2 937 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 PTAR1Q7Z6K3 402 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 TBC1D1Q86TI0 1168 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ARID3BQ8IVW6 561 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 BBS7Q8IWZ6 715 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CMTM8Q8IZV2 173 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 OR4L1Q8NH43 312 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 TTC8Q8TAM2 541 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SHKBP1Q8TBC3 707 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 FAM45AQ8TCE6 357 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 BLOC1S5Q8TDH9 187 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 DDI1Q8WTU0 396 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SLC22A17Q8WUG5 538 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 POF1BQ8WVV4 589 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CCDC126Q96EE4 140 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ATXN7L3BQ96GX2 97 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ELMO2Q96JJ3 720 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 DNAJC1Q96KC8 554 aaKnown RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SAMD11Q96NU1 681 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SORT1Q99523 831 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CORO1BQ9BR76 489 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 C20orf27Q9GZN8 174 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 DRC3Q9H069 523 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 LRMDAQ9H2I8 198 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 MRPL46Q9H2W6 279 aaKnown RBP8.29□□□□□ -1.08
ATXN3-235ENST00000556082 MAGEE1Q9HCI5 957 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 IGSF5Q9NSI5 407 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 CATSPERZQ9NTU4 200 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ABCB8Q9NUT2 735 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 DNAJC28Q9NX36 388 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 LNPEPQ9UIQ6 1025 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ZFP69BQ9UJL9 534 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 KCTD3Q9Y597 815 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 SPO11Q9Y5K1 396 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ACTL7AQ9Y615 435 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 ARL5AQ9Y689 179 aa8.29□□□□□ -1.08
ATXN3-235ENST00000556082 LCHNA4D1U4 455 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 SLCO1B7G3V0H7 640 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 H0YHG0 523 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ZNF195O14628 629 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 AURKAO14965 403 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 PFDN6O15212 129 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 CCL16O15467 120 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 HTRA2O43464 458 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 NPHS1O60500 1241 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 CLASP2O75122 1294 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 XYLBO75191 536 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 PGLSO95336 258 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 CYBBP04839 570 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 PDHA1P08559 390 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 LTA4HP09960 611 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 NQO1P15559 274 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 EN2P19622 333 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 FDXRP22570 491 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ATP5F1P24539 256 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ABCG1P45844 678 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 GRIA4P48058 902 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 STC1P52823 247 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 AQP5P55064 265 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ADARP55265 1226 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 RHOAP61586 193 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 PLAURQ03405 335 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ZBTB16Q05516 673 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 LMAN2Q12907 356 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 TRAF2Q12933 501 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 RIPK1Q13546 671 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ITGA9Q13797 1035 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 CAMK1Q14012 370 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 GALNT3Q14435 633 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 SMAD1Q15797 465 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 PLEKHG6Q3KR16 790 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 LIPMQ5VYY2 423 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 METTL21CQ5VZV1 264 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 LRRC8EQ6NSJ5 796 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 KLC3Q6P597 504 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms