RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SHCBP1LQ9BZQ2 653 aa10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 CEP44Q9C0F1 390 aa10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 DERL2Q9GZP9 239 aa10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 MMADHCQ9H3L0 296 aaPredicted RBP10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 APPL1Q9UKG1 709 aa10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 CDYLQ9Y232 598 aa10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
EFCAB11-209ENST00000556005 C1orf232A0A0U1RR37 186 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CCDC189A1A4V9 331 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 E5RI56 91 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 E9PBE3 544 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GRID2O43424 1007 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KLHL41O60662 606 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PRAMEF12O95522 483 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 POP4O95707 220 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PABPC1P11940 636 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 TYRP14679 529 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 HNRNPLP14866 589 aaKnown RBP eCLIP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 TCF3P15923 654 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CHRM3P20309 590 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GKP32189 559 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 HNF1BP35680 557 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CPA2P48052 419 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KCNC1P48547 511 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 HERVK_113P63132 956 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ECT2LQ008S8 904 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ZNF77Q15935 545 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 FUT11Q495W5 492 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 DNAL1Q4LDG9 190 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PRSS36Q5K4E3 855 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SH2D4BQ5SQS7 431 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ZNF678Q5SXM1 525 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PAQR3Q6TCH7 311 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 FRMD7Q6ZUT3 714 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GRASPQ7Z6J2 395 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ADGRG2Q8IZP9 1017 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 FAM13CQ8NE31 585 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KCNJ9Q92806 393 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KIAA1191Q96A73 305 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 FAM136AQ96C01 138 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 EID2BQ96D98 161 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ASB2Q96Q27 587 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GPR21Q99679 349 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 LBHD1Q9BQE6 289 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CCDC28BQ9BUN5 200 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CPEB1Q9BZB8 566 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 NUF2Q9BZD4 464 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 LINC00597Q9H2U6 94 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GTSE1Q9NYZ3 720 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 TRMT6Q9UJA5 497 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 MED16Q9Y2X0 877 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 PCDHB1Q9Y5F3 818 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 OAS3Q9Y6K5 1087 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ANKRD36A6QL64 1941 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 A0A0U1RQS6 177 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 A0A1W2PQ67 120 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CAPN8A6NHC0 703 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SYCE1LA8MT33 242 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 A8MUI8 341 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SLC9A3R1O14745 358 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CHUKO15111 745 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 DCXO43602 365 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 OR1I1O60431 355 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 KERAO60938 352 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 WFS1O76024 890 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SUPT7LO94864 414 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 POU2F2P09086 479 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 HSPA1AP0DMV8 641 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 HSPA1BP0DMV9 641 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ZNF7P17097 686 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CCND1P24385 295 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 STK19P49842 368 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 MXRA7P84157 204 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 LSM12Q3MHD2 195 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CARD16Q5EG05 197 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 WASHC2DQ5SRD0 308 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 LYPLAL1Q5VWZ2 237 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 C22orf39Q6P5X5 142 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SNX20Q7Z614 316 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 CUZD1Q86UP6 607 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 RIN3Q8TB24 985 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 ZNF641Q96N77 438 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 OR52B2Q96RD2 323 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 LYSMD1Q96S90 227 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 WDR55Q9H6Y2 383 aaPredicted RBP10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 RNF112Q9ULX5 631 aa10.04□□□□□ -0.8
EFCAB11-209ENST00000556005 GOLGA8QA0A0J9YX86 632 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 GOLGA8OA6NCC3 632 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 GOLGA8NF8WBI6 632 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 H3BMM5 538 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 NEMP1O14524 444 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PRMT5O14744 637 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 PER2O15055 1255 aa10.03□□□□□ -0.8
EFCAB11-209ENST00000556005 SLC22A2O15244 555 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms