RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CKMT1AP12532 417 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 JUNDP17535 347 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 GM2AP17900 193 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 PSMB4P28070 264 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 TNFRSF8P28908 595 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 VIPR1P32241 457 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 KIAA1024LP59773 190 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 SARNPP82979 210 aaKnown RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 CDK16Q00536 496 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 SEMG2Q02383 582 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 SEMA5AQ13591 1074 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 NFATC4Q14934 902 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 MORF4L2Q15014 288 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 CNGA3Q16281 694 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 DHRS13Q6UX07 377 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 LIPIQ6XZB0 460 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 PPP1R21Q6ZMI0 780 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 CEP128Q6ZU80 1094 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 TMPRSS12Q86WS5 348 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 PHACTR4Q8IZ21 702 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 RBFAQ8N0V3 343 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 TAB3Q8N5C8 712 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 PAF1Q8N7H5 531 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 EIF1ADQ8N9N8 165 aaKnown RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 BTN2A2Q8WVV5 523 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.62□□□□□ -0.874e-7■■■■■ 58.1
ACTN1-215ENST00000555616 COQ10AQ96MF6 247 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 SEMA3CQ99985 751 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 LRRC61Q9BV99 259 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 DUSP23Q9BVJ7 150 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 FRMD8Q9BZ67 464 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 MTRF1LQ9UGC7 380 aaKnown RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 U3KQA8 63 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 ANKRD11Q6UB99 2663 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-215ENST00000555616 CHD6Q8TD26 2715 aa9.62□□□□□ -0.87
ACTN1-215ENST00000555616 SHROOM3Q8TF72 1996 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 DOCK9Q9BZ29 2069 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 NPIPB15A6NHN6 443 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 BHMG1C9JSJ3 638 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 K7ESM1 405 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PSMD11O00231 422 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TPP1O14773 563 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 METTL18O95568 372 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CAPNS1P04632 268 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PCCBP05166 539 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 H2AFXP16104 143 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TPSB2P20231 275 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CA4P22748 312 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 LHCGRP22888 699 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 NFKBIAP25963 317 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 IVDP26440 423 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 MAGEA6P43360 314 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ITGA8P53708 1063 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 GEMP55040 296 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PLTPP55058 493 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 DSC2Q02487 901 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 MPP3Q13368 585 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 IHHQ14623 411 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 INPP5AQ14642 412 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 BRD3Q15059 726 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TPSAB1Q15661 275 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 SLC14A2Q15849 920 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ALG11Q2TAA5 492 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CCDC157Q569K6 752 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ARMC12Q5T9G4 340 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 RNASEH2BQ5TBB1 312 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ESRP1Q6NXG1 681 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ZCCHC8Q6NZY4 707 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 USP45Q70EL2 814 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 LINC00523Q86TU6 105 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CBARPQ8N350 705 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PLA2G15Q8NCC3 412 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ARRDC2Q8TBH0 407 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PDCD6IPQ8WUM4 868 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PIH1D2Q8WWB5 315 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ZCCHC14Q8WYQ9 949 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 CPT1BQ92523 772 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 SCRN2Q96FV2 425 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 IMP4Q96G21 291 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 APOLD1Q96LR9 279 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 FSD1LQ9BXM9 530 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TDRD1Q9BXT4 1180 aaKnown RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PARD6BQ9BYG5 372 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 FOXP3Q9BZS1 431 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TSPYL1Q9H0U9 437 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 TCEAL2Q9H3H9 227 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-215ENST00000555616 LRRC40Q9H9A6 602 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 GRHL1Q9NZI5 618 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 SPASTQ9UBP0 616 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 FAM153AQ9UHL3 310 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 RAB21Q9UL25 225 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms