RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CNOT6Q9ULM6 557 aaKnown RBP20.4■□□□□ 0.86
VTI1B-205ENST00000555543 PADI4Q9UM07 663 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 CLCA2Q9UQC9 943 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 TMEM98Q9Y2Y6 226 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 ST14Q9Y5Y6 855 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 LOC285095A0A1B0GVY8 99 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 TAF4O00268 1085 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 AURKAO14965 403 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 ARHGAP6O43182 974 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 IVLP07476 585 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 RBP3P10745 1247 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 CHRNA4P43681 627 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 RPIAP49247 311 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 NRROSQ86YC3 692 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 MAPK15Q8TD08 544 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 CCHCR1Q8TD31 782 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 HES6Q96HZ4 224 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 HIC2Q96JB3 615 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 FAM83DQ9H4H8 585 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 RSPH14Q9UHP6 348 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 TRHDEQ9UKU6 1024 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 GUCA1BQ9UMX6 200 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 OAS3Q9Y6K5 1087 aaKnown RBP20.39■□□□□ 0.85
VTI1B-205ENST00000555543 RP1P56715 2156 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 LAMA5O15230 3695 aa20.39■□□□□ 0.85
VTI1B-205ENST00000555543 APC2O95996 2303 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 DSPP15924 2871 aaKnown RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 CELSR3Q9NYQ7 3312 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 SCN8AQ9UQD0 1980 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 NOBOXO60393 691 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 TJP3O95049 919 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 CETN2P41208 172 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 TMC3Q7Z5M5 1100 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 CDKL3Q8IVW4 592 aaPredicted RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 RNF10Q8N5U6 811 aaKnown RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 PDCD7Q8N8D1 485 aaKnown RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 GPR26Q8NDV2 337 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 FAM46DQ8NEK8 389 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 GPR156Q8NFN8 814 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 IPMKQ8NFU5 416 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 GPBAR1Q8TDU6 330 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 SCARF2Q96GP6 870 aaPredicted RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 GBA3Q9H227 469 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC86Q9H6F5 360 aaKnown RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 RABGEF1Q9UJ41 708 aa20.38■□□□□ 0.85
VTI1B-205ENST00000555543 PCYT1BQ9Y5K3 369 aaPredicted RBP20.38■□□□□ 0.85
VTI1B-205ENST00000555543 BPTFQ12830 3046 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 PKD1L2Q7Z442 2459 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 TCRBV7S2A1N4TA0A589 114 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 RGSL1A5PLK6 1076 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 B4DGG1 531 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 PYGLP06737 847 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 AK4P27144 223 aaPredicted RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 CYP4F3Q08477 520 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 KLF1Q13351 362 aaPredicted RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 SIRPB2Q5JXA9 342 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 ALS2CLQ60I27 953 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 DARS2Q6PI48 645 aaKnown RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 MARK2Q7KZI7 788 aaKnown RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 CACTIN-AS1Q8N1I8 211 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 SLC25A41Q8N5S1 370 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC112Q8NEF3 446 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 NAT6Q93015 286 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC74AQ96AQ1 378 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC3Q9BQI4 270 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 GPR63Q9BZJ6 419 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 ABCG4Q9H172 646 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 SPATS2LQ9NUQ6 558 aaKnown RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 TRNAU1APQ9NX07 287 aaKnown RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 R3HDM2Q9Y2K5 976 aaKnown RBP20.37■□□□□ 0.85
VTI1B-205ENST00000555543 PLEKHM1Q9Y4G2 1056 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 PCDHB1Q9Y5F3 818 aa20.37■□□□□ 0.85
VTI1B-205ENST00000555543 KCNN4O15554 427 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ATP1A1P05023 1023 aaKnown RBP20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ADCY8P40145 1251 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 DCDC1P59894 354 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 CCZ1BP86790 482 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 CCZ1P86791 482 aaPredicted RBP20.36■□□□□ 0.85
VTI1B-205ENST00000555543 CTBSQ01459 385 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ILF3Q12906 894 aaKnown RBP eCLIP20.36■□□□□ 0.85
VTI1B-205ENST00000555543 MPP3Q13368 585 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ANKRD20A2Q5SQ80 823 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ANKRD20A1Q5TYW2 823 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ANKRD20A3Q5VUR7 823 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC70Q6NSX1 233 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 OGFOD3Q6PK18 319 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 PROSER1Q86XN7 944 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 LRRC8AQ8IWT6 810 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 OR2M4Q96R27 311 aa20.36■□□□□ 0.85
VTI1B-205ENST00000555543 NFKBIL1Q9UBC1 381 aaPredicted RBP20.36■□□□□ 0.85
VTI1B-205ENST00000555543 ARHGEF17Q96PE2 2063 aaPredicted RBP20.35■□□□□ 0.85
VTI1B-205ENST00000555543 ZFHX4Q86UP3 3567 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 SRRM3A6NNA2 597 aaPredicted RBP20.35■□□□□ 0.85
VTI1B-205ENST00000555543 KRT86O43790 486 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 EPOP01588 193 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 BPIP17213 487 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 PSMB4P28070 264 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 OLIG2Q13516 323 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 SLC1A5Q15758 541 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms