RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 LUMP51884 338 aaPredicted RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 NAE1Q13564 534 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 GPATCH4Q5T3I0 446 aaKnown RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 SUSD1Q6UWL2 747 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 CEACAM20Q6UY09 585 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 APLFQ8IW19 511 aaPredicted RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 SRBD1Q8N5C6 995 aaKnown RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 ZBTB10Q96DT7 871 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 PABPC5Q96DU9 382 aaKnown RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 CMKLR1Q99788 373 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 PPP1R14DQ9NXH3 145 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 TTC7AQ9ULT0 858 aaPredicted RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 A4GNTQ9UNA3 340 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 ERVK-11Q9UQG0 969 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 OR2W1Q9Y3N9 320 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 LOXL2Q9Y4K0 774 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 A0A087X002 238 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 BLOC1S5-TXNDC5H3BN57 136 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 TNPO2O14787 897 aaKnown RBP3.37□□□□□ -1.87
SNX6-204ENST00000555541 LDLRAD4O15165 306 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 SEC14L5O43304 696 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 HOXB5P09067 269 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 DSCR10P59022 87 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 ISL1P61371 349 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 SORDQ00796 357 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 PDE1BQ01064 536 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 TLE2Q04725 743 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 FOXD4Q12950 439 aaPredicted RBP3.37□□□□□ -1.87
SNX6-204ENST00000555541 CAMK1Q14012 370 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 GTSCR1Q86UQ5 136 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 GCC1Q96CN9 775 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 MPHOSPH8Q99549 860 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 MTERF1Q99551 399 aaKnown RBP3.37□□□□□ -1.87
SNX6-204ENST00000555541 SYT17Q9BSW7 474 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 CDK19Q9BWU1 502 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 FKRPQ9H9S5 495 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 MPP6Q9NZW5 540 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 DLGAP4Q9Y2H0 992 aa3.37□□□□□ -1.87
SNX6-204ENST00000555541 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 IFRD1O00458 451 aaPredicted RBP3.36□□□□□ -1.87
SNX6-204ENST00000555541 PCDH7O60245 1069 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 WDR1O75083 606 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 PEX14O75381 377 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 INHBAP08476 426 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 HSD3B1P14060 373 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 GGT5P36269 586 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 VAMP2P63027 116 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 GTF2H2Q13888 395 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 ZNF234Q14588 700 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 TAF12Q16514 161 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 SLC9B1Q4ZJI4 515 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 PDSS1Q5T2R2 415 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 FRG2Q64ET8 278 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 GTF2H2CQ6P1K8 395 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 DUS1LQ6P1R4 473 aaKnown RBP3.36□□□□□ -1.87
SNX6-204ENST00000555541 SLC27A1Q6PCB7 646 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 CYP26C1Q6V0L0 522 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 PCDH20Q8N6Y1 951 aaKnown RBP3.36□□□□□ -1.87
SNX6-204ENST00000555541 ANKRD42Q8N9B4 389 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 APOPT1Q96IL0 206 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 ST6GAL2Q96JF0 529 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 MAELQ96JY0 434 aaKnown RBP3.36□□□□□ -1.87
SNX6-204ENST00000555541 ASCL2Q99929 193 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 FSD1Q9BTV5 496 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 IFIH1Q9BYX4 1025 aaKnown RBP3.36□□□□□ -1.87
SNX6-204ENST00000555541 PPCSQ9HAB8 311 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 FAM118AQ9NWS6 357 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 RNF215Q9Y6U7 377 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 UTYO14607 1347 aa3.36□□□□□ -1.87
SNX6-204ENST00000555541 USP17L23D6RBM5 183 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 DVL1O14640 695 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 HNRNPA1P09651 372 aaKnown RBP eCLIP3.35□□□□□ -1.87
SNX6-204ENST00000555541 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 CDAP32320 146 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 FASLGP48023 281 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 HOXA1P49639 335 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 GNAQP50148 359 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 MMP14P50281 582 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 DVL1P1P54792 670 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 EEF1A1P68104 462 aaKnown RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 CSNK2A1P68400 391 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 RPP30P78346 268 aaKnown RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 RPL24P83731 157 aaKnown RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 USP41Q3LFD5 358 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 EEF1A1P5Q5VTE0 462 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 ZNF280DQ6N043 979 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 FAM53AQ6NSI3 398 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 BRAT1Q6PJG6 821 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 PQLC2Q6ZP29 291 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 SLC46A3Q7Z3Q1 461 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 HAPLN4Q86UW8 402 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 CNBD1Q8NA66 436 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 CSNK2A3Q8NEV1 391 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 PIGTQ969N2 578 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 RHBDF1Q96CC6 855 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 KLHL29Q96CT2 875 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 UBXN10Q96LJ8 280 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 POLR3CQ9BUI4 534 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms