RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DGKBQ9Y6T7 804 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CLCA4Q14CN2 919 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 GPR158Q5T848 1215 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NAIF1Q69YI7 327 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 OR52K2Q8NGK3 314 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SYN2Q92777 582 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MTRRQ9UBK8 725 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 GMEB2Q9UKD1 530 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 IL33O95760 270 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CDH3P22223 829 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CDH4P55283 916 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SNAPC1Q16533 368 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 HID1Q8IV36 788 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 HDDC3Q8N4P3 179 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ULBP1Q9BZM6 244 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 HPF1Q9NWY4 346 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 GDAP2Q9NXN4 497 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SLC24A2Q9UI40 661 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 KCNS2Q9ULS6 477 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MEMO1Q9Y316 297 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ACTL7BQ9Y614 415 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 H3BM21 787 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 H3BSH0 61 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 H3BUI4 141 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CLDN4O14493 209 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PROSCO94903 275 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CALCAP01258 141 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 EPHX1P07099 455 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 AZGP1P25311 298 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PRKAA2P54646 552 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PTPRNQ16849 979 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PRAMEF17Q5VTA0 474 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ECHDC2Q86YB7 292 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 BSNDQ8WZ55 320 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 METTL8Q9H825 291 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 LEF1Q9UJU2 399 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 MTF2Q9Y483 593 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PTPRJQ12913 1337 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NRCAMQ92823 1304 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CAMSAP1Q5T5Y3 1602 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 A0A1W2PQJ5 194 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 IRGMA1A4Y4 181 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 NUDT17P0C025 328 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 FXR2P51116 673 aaKnown RBP eCLIP6.87□□□□□ -1.312e-6■■■■□ 25.1
SYNE2-216ENST00000555002 RPP38P78345 283 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 OC90Q02509 493 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 RASGEF1BQ0VAM2 473 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 CCINQ13939 588 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ABRAQ8N0Z2 381 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TCAIMQ8N3R3 496 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ANKS1AQ92625 1134 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 HTRA1Q92743 480 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ZC3H10Q96K80 434 aaKnown RBP6.87□□□□□ -1.31
SYNE2-216ENST00000555002 TCF25Q9BQ70 676 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 OSBPL2Q9H1P3 480 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 SNX7Q9UNH6 387 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 PCDHGB5Q9Y5G0 923 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF609O15014 1411 aa6.87□□□□□ -1.31
SYNE2-216ENST00000555002 OR2AT4A6NND4 320 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FAM228BP0C875 321 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 AKR1A1P14550 325 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 KELP23276 732 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PUM1Q14671 1186 aaKnown RBP eCLIP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GALNT18Q6P9A2 607 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SYVN1Q86TM6 617 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 AKAP14Q86UN6 197 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TREML1Q86YW5 311 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PIGXQ8TBF5 258 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF700Q9H0M5 742 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 POPDC2Q9HBU9 364 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FAM205AQ6ZU69 1335 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 LRRC72A6NJI9 287 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FUT4P22083 530 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 NR0B1P51843 470 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TAS2R50P59544 299 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FOXO4P98177 505 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SLC6A3Q01959 620 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 MAPKAPK3Q16644 382 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 RGS21Q2M5E4 152 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PABPC1LQ4VXU2 614 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ALG10Q5BKT4 473 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CAPN13Q6MZZ7 669 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 MINDY2Q8NBR6 621 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 REPS2Q8NFH8 660 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 POF1BQ8WVV4 589 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 THRSPQ92748 146 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 EBPLQ9BY08 206 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TMBIM4Q9HC24 238 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PRKCHP24723 683 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 RPL22P35268 128 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ERVK-21P61565 698 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF234Q14588 700 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 NKAPLQ5M9Q1 402 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PRAMEF19Q5SWL8 479 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms