RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ANKRD20A8PQ5CZ79 823 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 TNFAIP8L3Q5GJ75 292 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
SHMT2-214ENST00000554604 P3H4Q92791 437 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 EVA1BQ9NVM1 165 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
SHMT2-214ENST00000554604 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
SHMT2-214ENST00000554604 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 TOR1BO14657 336 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 SCAMP1O15126 338 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 KRT37O76014 449 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ELFN1P0C7U0 828 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 NFKBIAP25963 317 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 MAGEA4P43358 317 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 MMP13P45452 471 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 GNGT1P63211 74 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ILKQ13418 452 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 IRF4Q15306 451 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PRUNE1Q86TP1 453 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 TMPRSS12Q86WS5 348 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ZSWIM9Q86XI8 627 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 MARCH9Q86YJ5 346 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PPIL6Q8IXY8 311 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PQLC3Q8N755 202 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PLD5Q8N7P1 536 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 TP53I13Q8NBR0 393 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ZNF548Q8NEK5 533 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PCDH19Q8TAB3 1148 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 BTN2A2Q8WVV5 523 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ECHDC3Q96DC8 303 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 RTP4Q96DX8 246 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 SLC13A1Q9BZW2 595 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 CCDC86Q9H6F5 360 aaKnown RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 CAAP1Q9H8G2 361 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 NLGN3Q9NZ94 848 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 SAE1Q9UBE0 346 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 PCDHGC4Q9Y5F7 938 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 ARHGEF17Q96PE2 2063 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-214ENST00000554604 CFAP47Q6ZTR5 3102 aa12.44□□□□□ -0.42
SHMT2-214ENST00000554604 LRP4O75096 1905 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 A0A1W2PQ67 120 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 A8MX80 341 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 AQP9O43315 295 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 MFSD11O43934 449 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 SOCS5O75159 536 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 NEBLO76041 1014 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 IVLP07476 585 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 ACP1P24666 158 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 HTR1BP28222 390 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 RPL22P35268 128 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 GDF10P55107 478 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 ITKQ08881 620 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 EIF2B5Q13144 721 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 CBLBQ13191 982 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 XRCC4Q13426 336 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 INPP5AQ14642 412 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 WSCD2Q2TBF2 565 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 PRRT3Q5FWE3 981 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 TPRG1LQ5T0D9 272 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 UBAP2Q5T6F2 1119 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 FAXCQ5TGI0 409 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 DARS2Q6PI48 645 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 C4orf22Q6V702 233 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 MACC1Q6ZN28 852 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 CENPUQ71F23 418 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 LMX1AQ8TE12 382 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 NUDCD1Q96RS6 583 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 IL12RB2Q99665 862 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 NOD2Q9HC29 1040 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 LRRC4CQ9HCJ2 640 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 NT5MQ9NPB1 228 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 HAUS2Q9NVX0 235 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 SPASTQ9UBP0 616 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 APOBEC3BQ9UH17 382 aaKnown RBP12.43□□□□□ -0.42
SHMT2-214ENST00000554604 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 CSNK1G3Q9Y6M4 447 aa12.43□□□□□ -0.42
SHMT2-214ENST00000554604 UNC13CQ8NB66 2214 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 TRABD2BA6NFA1 517 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 K7ESM1 405 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 TRAFD1O14545 582 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-214ENST00000554604 ACSL3O95573 720 aa12.42□□□□□ -0.42
SHMT2-214ENST00000554604 PEX11BO96011 259 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms