RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 UNC45BQ8IWX7 931 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 NUP93Q8N1F7 819 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 Q8N1X5 172 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC35F6Q8N357 371 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 ANKRD20A12PQ8NF67 263 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 OR8K1Q8NGG5 319 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 GOT1L1Q8NHS2 421 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 ACER1Q8TDN7 264 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 ADAMTS15Q8TE58 950 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC22A17Q8WUG5 538 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 HMGB4Q8WW32 186 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 CRYGNQ8WXF5 182 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 THAP4Q8WY91 577 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC9A6Q92581 669 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 RSC1A1Q92681 617 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 RAD54LQ92698 747 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 USP6NLQ92738 828 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 C3orf49Q96BT1 292 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 PRR11Q96HE9 360 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 CCDC17Q96LX7 622 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 CCDC43Q96MW1 224 aaKnown RBP5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 COG8Q96MW5 612 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 TSGA13Q96PP4 275 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 TRAPPC9Q96Q05 1148 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 ERGIC2Q96RQ1 377 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 TUBGCP2Q9BSJ2 902 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 POLR3CQ9BUI4 534 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 FSD1LQ9BXM9 530 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 PAIP1Q9H074 479 aaKnown RBP5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 C2orf40Q9H1Z8 148 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 SAP30LQ9HAJ7 183 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 USP29Q9HBJ7 922 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 EXOC1Q9NV70 894 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 FBXO28Q9NVF7 368 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 NYAP2Q9P242 653 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 FBXL5Q9UKA1 691 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 DAPP1Q9UN19 280 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 VPS4AQ9UN37 437 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 CNTN6Q9UQ52 1028 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 TRANK1O15050 2925 aa5.35□□□□□ -1.55
MTHFD1-206ENST00000554353 PFASO15067 1338 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CYP3A7-CYP3A51PA0A087WV96 503 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ZBTB5O15062 677 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SUV39H1O43463 412 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TSPAN3O60637 253 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CNMDO75829 334 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TJP3O95049 919 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TPM1P09493 284 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 HNRNPA1P09651 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 PNMA6AP0CW24 399 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 KRT4P19013 534 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CYP3A7P24462 503 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 HNRNPH3P31942 346 aaKnown RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CXCR5P32302 372 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 MSH2P43246 934 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 POLD2P49005 469 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 KLK7P49862 253 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 DIO1P49895 249 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CCNA1P78396 465 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SIM1P81133 766 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 DMTNQ08495 405 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC12A1Q13621 1099 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TUBB2AQ13885 445 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SEMA3AQ14563 771 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ZCWPW2Q504Y3 356 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 KRTCAP3Q53RY4 240 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 AARS2Q5JTZ9 985 aaKnown RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ZNF569Q5MCW4 686 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 FAM90A2PQ658T7 463 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 IRGCQ6NXR0 463 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 NFRKBQ6P4R8 1299 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 KIRREL2Q6UWL6 708 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SLC9B2Q86UD5 537 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 GGNQ86UU5 652 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TRABD2AQ86V40 505 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 OR8H3Q8N146 312 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 GUF1Q8N442 669 aaKnown RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CSGALNACT2Q8N6G5 542 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 MNS1Q8NEH6 495 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 RASSF8Q8NHQ8 419 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CSGALNACT1Q8TDX6 532 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ST8SIA4Q92187 359 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 DNAJC19Q96DA6 116 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CALML4Q96GE6 196 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ZNF845Q96IR2 970 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CNOT6LQ96LI5 555 aaKnown RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 C12orf42Q96LP6 360 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 PRRX2Q99811 253 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 PI4K2AQ9BTU6 479 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TUBB2BQ9BVA1 445 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 UBXN6Q9BZV1 441 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TOR3AQ9H497 397 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 CCDC134Q9H6E4 229 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SUDS3Q9H7L9 328 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SEPSECSQ9HD40 501 aaKnown RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 LZTFL1Q9NQ48 299 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 AGPAT5Q9NUQ2 364 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms