RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MOSPD1Q9UJG1 213 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 LOXL2Q9Y4K0 774 aa6.58□□□□□ -1.36
SLIRP-203ENST00000554074 TLN1Q9Y490 2541 aaKnown RBP6.58□□□□□ -1.36
SLIRP-203ENST00000554074 FLNBO75369 2602 aaKnown RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 RHPN2P1A8MT19 583 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 B4GAT1O43505 415 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 MTA2O94776 668 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ECEL1O95672 775 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PRB1P04280 392 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ITGB2P05107 769 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 HLA-DQB2P05538 268 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 TMEM253P0C7T8 217 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CTPS1P17812 591 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 AK4P27144 223 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CD1CP29017 333 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CASP14P31944 242 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ARHGAP25P42331 645 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 POLD2P49005 469 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF75DP51815 510 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 EPHB1P54762 984 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 MAZP56270 477 aaKnown RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 TAS2R40P59535 323 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 GPLD1P80108 840 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 IFI35P80217 286 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CTBSQ01459 385 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 GBE1Q04446 702 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ITKQ08881 620 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 NIPAL4Q0D2K0 466 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ATP13A4Q4VNC1 1196 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 TAF1BQ53T94 588 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 HENMT1Q5T8I9 393 aaKnown RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 DENND2CQ68D51 928 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 SLC30A9Q6PML9 568 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 TMPRSS9Q7Z410 1059 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 DTX1Q86Y01 620 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 GALNT13Q8IUC8 556 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 SFTPA2Q8IWL1 248 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CCDC13Q8IYE1 715 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 Q8N9G6 341 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 OR4D9Q8NGE8 314 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 OR8K1Q8NGG5 319 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PTCD2Q8WV60 388 aaKnown RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 MED8Q96G25 268 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ZNF830Q96NB3 372 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 RNF157Q96PX1 679 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PHF12Q96QT6 1004 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 BRD8Q9H0E9 1235 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 SEMA6CQ9H3T2 930 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PCDH9Q9HC56 1237 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ZNHIT6Q9NWK9 470 aaKnown RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PDP2Q9P2J9 529 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 NFKBIL1Q9UBC1 381 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PISDQ9UG56 409 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 CHKBQ9Y259 395 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 PCDHGA3Q9Y5H0 932 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 ST14Q9Y5Y6 855 aa6.57□□□□□ -1.36
SLIRP-203ENST00000554074 IGHV1OR21-1A0A087WYE8 117 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PRAMEF33A0A0G2JMD5 474 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 IGHV5-10-1A0A0J9YXX1 117 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 C1orf232A0A0U1RR37 186 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6CA6NDK9 693 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6BA6NDN3 693 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6L3A6NEY3 463 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ANKRD66B4E2M5 251 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GPR89AB7ZAQ6 455 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 C9orf172C9J069 976 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 EFSO43281 561 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 AKR1B10O60218 316 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PRAMEF10O60809 474 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 DNAJC6O75061 913 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CLDN7O95471 211 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 MMP2P08253 660 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GPR89BP0CG08 455 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GOLGA6DP0CG33 693 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 THRAP10827 490 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 HGFP14210 728 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SLC2A4P14672 509 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ZFXP17010 805 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ITIH1P19827 911 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 KDELR1P24390 212 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ALDH4A1P30038 563 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 GJC1P36383 396 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ETV5P41161 510 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ACTR1BP42025 376 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SLC1A1P43005 524 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SPINT3P49223 89 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 CLCNKAP51800 687 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 LIMK2P53671 638 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 EPHA4P54764 986 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 OR1D5P58170 312 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 DCDC1P59894 354 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 ACTR1AP61163 376 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 SLC10A2Q12908 348 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 TBX2Q13207 712 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-203ENST00000554074 BIRC2Q13490 618 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 C16orf72Q14CZ0 275 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 PDK1Q15118 436 aa6.56□□□□□ -1.36
SLIRP-203ENST00000554074 TCEAL1Q15170 157 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms