RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 ZNF678Q5SXM1 525 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 MFSD4BQ5TF39 518 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CHDHQ8NE62 594 aaPredicted RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 NDNFQ8TB73 568 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 HDAC2Q92769 488 aaKnown RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TEX37Q96LM6 180 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 KCNA7Q96RP8 456 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 RMND5AQ9H871 391 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ZNF229Q9UJW7 825 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 NCAM2O15394 837 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 RBP1P09455 135 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 PTPN2P17706 415 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CASP2P42575 452 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ACADSBP45954 432 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CTU2Q2VPK5 515 aaKnown RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 UGT3A1Q6NUS8 523 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 OR7A2PQ8NGA2 310 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 BPIFB1Q8TDL5 484 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 EXT2Q93063 718 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TUBGCP3Q96CW5 907 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 HSFY1Q96LI6 401 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 GPR20Q99678 358 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ATXN3LQ9H3M9 355 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 GDAP2Q9NXN4 497 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ASPDHA6ND91 283 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 LRRC14BA6NHZ5 514 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CDK14O94921 469 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 HGFP14210 728 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 PIGAP37287 484 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 NR4A2P43354 598 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 IST1P53990 364 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TPD52P55327 224 aaPredicted RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 FPGSQ05932 587 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 SLC13A2Q13183 592 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ADPRMQ3LIE5 342 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ATAD3BQ5T9A4 648 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 ANKRD34AQ69YU3 496 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 DENND5AQ6IQ26 1287 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 LAIR2Q6ISS4 152 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 BNIPLQ7Z465 357 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CLIP4Q8N3C7 705 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TWIST2Q8WVJ9 160 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CAPSLQ8WWF8 208 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 UBXN10Q96LJ8 280 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TBL1YQ9BQ87 522 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TRMOQ9BU70 441 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 TUBB1Q9H4B7 451 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 SMURF2Q9HAU4 748 aa11.32□□□□□ -0.6
NRDE2-202ENST00000553409 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
NRDE2-202ENST00000553409 DYTNA2CJ06 578 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 MTSS1O43312 755 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 NDUFS2O75306 463 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 DAB1O75553 588 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 LINC00032P0C843 101 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 OR4D2P58180 307 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 ADAM17P78536 824 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 SEMA3BQ13214 749 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 RIMKLAQ8IXN7 391 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 EXOC8Q8IYI6 725 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 WNT8BQ93098 351 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 SDCCAG3Q96C92 435 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 BTRCQ9Y297 605 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 SHROOM3Q8TF72 1996 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 M0R3G1 203 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 MATN4O95460 622 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 PCMT1P22061 227 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 FSHRP23945 695 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 CHRNA4P43681 627 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 CD47Q08722 323 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 NDUFA5Q16718 116 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 TMEM207Q6UWW9 146 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 UNC93AQ86WB7 457 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 PPHLN1Q8NEY8 458 aaKnown RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 HTRA1Q92743 480 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 C18orf25Q96B23 403 aaPredicted RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 ZNF419Q96HQ0 510 aaPredicted RBP11.31□□□□□ -0.6
NRDE2-202ENST00000553409 VAT1Q99536 393 aa11.31□□□□□ -0.6
NRDE2-202ENST00000553409 AMBRA1Q9C0C7 1298 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms