RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 FECHP22830 423 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 PTPN3P26045 913 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CTBSQ01459 385 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CDK18Q07002 472 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 EIF3IQ13347 325 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 GALNT3Q14435 633 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 HENMT1Q5T8I9 393 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC70Q6NSX1 233 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 PDZD3Q86UT5 571 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CCNJLQ8IV13 435 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC50Q8IVM0 306 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 ZNF248Q8NDW4 579 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 ZDHHC1Q8WTX9 485 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 TEKT5Q96M29 485 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 OR2M4Q96R27 311 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 WDR24Q96S15 920 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 FAM83DQ9H4H8 585 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 ZFYVE1Q9HBF4 777 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-207ENST00000553290 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 UNC13CQ8NB66 2214 aa12.88□□□□□ -0.35
ACTN1-207ENST00000553290 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 HACD1B0YJ81 288 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
ACTN1-207ENST00000553290 INPP4BO15327 924 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 ASMTLO95671 621 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 PECAM1P16284 738 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-207ENST00000553290 AK4P27144 223 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-207ENST00000553290 PDX1P52945 283 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 COPS2P61201 443 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 LRP8Q14114 963 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 PPP2R5EQ16537 467 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 PCSK7Q16549 785 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 PYCR3Q53H96 274 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 B4GALNT4Q76KP1 1039 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 LYSMD3Q7Z3D4 306 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 SPRED1Q7Z699 444 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 TRIM74Q86UV6 250 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 C17orf82Q86X59 251 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-207ENST00000553290 GALNT13Q8IUC8 556 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 ARL14Q8N4G2 192 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 Q8N9G6 341 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-207ENST00000553290 SLC46A1Q96NT5 459 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 VAT1Q99536 393 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 STRADBQ9C0K7 418 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 VPS18Q9P253 973 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 TFR2Q9UP52 801 aa12.87□□□□□ -0.35
ACTN1-207ENST00000553290 KIF26BQ2KJY2 2108 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 A0A1W2PNU3 283 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 BTNL10A8MVZ5 291 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ECEL1O95672 775 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 NDST3O95803 873 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ITPKBP27987 946 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 CCKBRP32239 447 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ACTR1BP42025 376 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 MARCKSL1P49006 195 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 INHBCP55103 352 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 NAP1L1P55209 391 aaKnown RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 MAZP56270 477 aaKnown RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 DCDC1P59894 354 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ACTR1AP61163 376 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 B4GALNT1Q00973 533 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 BIRC2Q13490 618 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 MARK2Q7KZI7 788 aaKnown RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ZNF438Q7Z4V0 828 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 SFTPA2Q8IWL1 248 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 NAGSQ8N159 534 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 SPATA22Q8NHS9 363 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 KRT35Q92764 455 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 EID2BQ96D98 161 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 PRR11Q96HE9 360 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 GPR63Q9BZJ6 419 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 NFKBIL1Q9UBC1 381 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 FAM153AQ9UHL3 310 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms