RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TMEM9	Q9P0T7	183 aa		11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PRKAB1	Q9Y478	270 aa		11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PCDHGA7	Q9Y5G6	932 aa		11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	OAS3	Q9Y6K5	1087 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SETX	Q7Z333	2677 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1B-208	ENST00000552984	FADS2P1	A8MWK0	482 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CPNE6	O95741	557 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	MMP2	P08253	660 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PNLIP	P16233	465 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TEAD1	P28347	426 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CD1C	P29017	333 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CD86	P42081	329 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ARSD	P51689	593 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZBTB17	Q13105	803 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	GALNT3	Q14435	633 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PYCR3	Q53H96	274 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZFYVE27	Q5T4F4	411 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TIGD7	Q6NT04	549 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ADAMTSL4	Q6UY14	1074 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	JPH3	Q8WXH2	748 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CCDC74B	Q96LY2	380 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CCNL2	Q96S94	520 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CDH19	Q9H159	772 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PCDH9	Q9HC56	1237 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ARFGAP3	Q9NP61	516 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	DTL	Q9NZJ0	730 aa		11.43	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TLN1	Q9Y490	2541 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	IGHV5-10-1	A0A0J9YXX1	117 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	C1orf232	A0A0U1RR37	186 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	LRRD1	A4D1F6	860 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TMX2-CTNND1	H3BSU7	103 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ASMTL	O95671	621 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SLC4A1	P02730	911 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PIRT	P0C851	137 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	LIPC	P11150	499 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZNF30	P17039	623 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CCNC	P24863	283 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	NFKBIA	P25963	317 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	HNRNPH3	P31942	346 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	MESD	Q14696	234 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	NR1D2	Q14995	579 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PDK2	Q15119	407 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SLC18A3	Q16572	532 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	QPCT	Q16769	361 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ASTE1	Q2TB18	679 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZNF648	Q5T619	568 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	NPNT	Q6UXI9	565 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PIM3	Q86V86	326 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	LRRC49	Q8IUZ0	686 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CCDC13	Q8IYE1	715 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	PLD5	Q8N7P1	536 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CNTD1	Q8N815	330 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	LSM14A	Q8ND56	463 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CCNY	Q8ND76	341 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SLC37A2	Q8TED4	501 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	EID2B	Q96D98	161 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	HDAC11	Q96DB2	347 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SCARF2	Q96GP6	870 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	COX14	Q96I36	57 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TSGA13	Q96PP4	275 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CMKLR1	Q99788	373 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	SPTLC3	Q9NUV7	552 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KCTD5	Q9NXV2	234 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	UVRAG	Q9P2Y5	699 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CNOT6	Q9ULM6	557 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KCNK6	Q9Y257	313 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	HYOU1	Q9Y4L1	999 aa		11.42	□□□□□ -0.58
TUBA1B-208	ENST00000552984	IGHV1OR21-1	A0A087WYE8	117 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	C3orf70	A6NLC5	250 aa	Predicted RBP	11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	NVL	O15381	856 aa	Known RBP	11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	DNAJC6	O75061	913 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	JCHAIN	P01591	159 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	H2AFZ	P0C0S5	128 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KDELR1	P24390	212 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CYP4F2	P78329	520 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	BIRC2	Q13490	618 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ALS2CL	Q60I27	953 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	H2AFV	Q71UI9	128 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZNF765	Q7L2R6	523 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	LYSMD3	Q7Z3D4	306 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KDELC2	Q7Z4H8	507 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ZNF605	Q86T29	641 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	GALNT13	Q8IUC8	556 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	IQCD	Q96DY2	449 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	RNF157	Q96PX1	679 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	DNAJC7	Q99615	494 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	CHP1	Q99653	195 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ACSL6	Q9UKU0	697 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	HEY1	Q9Y5J3	304 aa		11.41	□□□□□ -0.58
TUBA1B-208	ENST00000552984	MYO18B	Q8IUG5	2567 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	AKR1B10	O60218	316 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KRT1	P04264	644 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	KRT7	P08729	469 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TMEM253	P0C7T8	217 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	THRA	P10827	490 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	FGF3	P11487	239 aa	Predicted RBP	11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	ACP5	P13686	325 aa		11.4	□□□□□ -0.58
TUBA1B-208	ENST00000552984	TNNT1	P13805	278 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms