RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 KCNC1P48547 511 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 C1QTNF8P60827 252 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 ZNF77Q15935 545 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 PRSS36Q5K4E3 855 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 SH2D4BQ5SQS7 431 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 PAQR3Q6TCH7 311 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 SPNS2Q8IVW8 549 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 FAM136AQ96C01 138 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 EID2BQ96D98 161 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 CMTM5Q96DZ9 223 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 CCDC28BQ9BUN5 200 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 NUF2Q9BZD4 464 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 C1orf21Q9H246 121 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 MMADHCQ9H3L0 296 aaPredicted RBP23.23■■□□□ 1.31
RITA1-203ENST00000552495 CDYLQ9Y232 598 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 MED16Q9Y2X0 877 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 DOCK6Q96HP0 2047 aa23.23■■□□□ 1.31
RITA1-203ENST00000552495 C1orf232A0A0U1RR37 186 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 CAPN8A6NHC0 703 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 E9PBE3 544 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 KLHL41O60662 606 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 ESR1P03372 595 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 PABPC1P11940 636 aaKnown RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 GKP32189 559 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 STK19P49842 368 aaPredicted RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 DMC1Q14565 340 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 MYLK3Q32MK0 819 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 DNAL1Q4LDG9 190 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 PDE12Q6L8Q7 609 aaKnown RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 C22orf39Q6P5X5 142 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 ELMSAN1Q6PJG2 1045 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 FRMD7Q6ZUT3 714 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 RAB44Q7Z6P3 723 aaPredicted RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 STAG3L4Q8TBR4 150 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 KIAA1191Q96A73 305 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 OTUB2Q96DC9 234 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 OR52B2Q96RD2 323 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 TTC1Q99614 292 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 GPR21Q99679 349 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 GTSE1Q9NYZ3 720 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 APPL1Q9UKG1 709 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 A0A0U1RQS6 177 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 GOLGA8CPA6NN73 597 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 HNRNPLP14866 589 aaKnown RBP eCLIP23.22■■□□□ 1.31
RITA1-203ENST00000552495 TCF3P15923 654 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 SP100P23497 879 aaPredicted RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 HNF1BP35680 557 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 HERVK_113P63132 956 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 ZNF678Q5SXM1 525 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 GRASPQ7Z6J2 395 aaPredicted RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 PCDH20Q8N6Y1 951 aaKnown RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 KCNJ9Q92806 393 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 ERVK-6Q9BXR3 956 aa23.22■■□□□ 1.31
RITA1-203ENST00000552495 TRMT6Q9UJA5 497 aaKnown RBP23.22■■□□□ 1.31
RITA1-203ENST00000552495 CHUKO15111 745 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 OR1I1O60431 355 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 POU2F2P09086 479 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 TYRP14679 529 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 NTHL1P78549 312 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 SETMARQ53H47 684 aaPredicted RBP23.21■■□□□ 1.31
RITA1-203ENST00000552495 WASHC2DQ5SRD0 308 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 UGT3A1Q6NUS8 523 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 RBM15BQ8NDT2 890 aaKnown RBP23.21■■□□□ 1.31
RITA1-203ENST00000552495 WDR55Q9H6Y2 383 aaPredicted RBP23.21■■□□□ 1.31
RITA1-203ENST00000552495 PCDHB1Q9Y5F3 818 aa23.21■■□□□ 1.31
RITA1-203ENST00000552495 GOLGA8QA0A0J9YX86 632 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 CCDC189A1A4V9 331 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 GOLGA8OA6NCC3 632 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 E5RI56 91 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 GOLGA8NF8WBI6 632 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 H3BMM5 538 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 NEMP1O14524 444 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 DCXO43602 365 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 KERAO60938 352 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 EPHA3P29320 983 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 PRDX6P30041 224 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 MXRA7P84157 204 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 ECT2LQ008S8 904 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 OR4D1Q15615 310 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 LSM12Q3MHD2 195 aaKnown RBP23.2■■□□□ 1.3
RITA1-203ENST00000552495 ACCSLQ4AC99 568 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 CTSL3PQ5NE16 218 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 ASTLQ6HA08 431 aaPredicted RBP23.2■■□□□ 1.3
RITA1-203ENST00000552495 SPRED2Q7Z698 418 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 CUZD1Q86UP6 607 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 SUGP1Q8IWZ8 645 aaKnown RBP23.2■■□□□ 1.3
RITA1-203ENST00000552495 ASB2Q96Q27 587 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 LYSMD1Q96S90 227 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 ATOH8Q96SQ7 321 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 LBHD1Q9BQE6 289 aaPredicted RBP23.2■■□□□ 1.3
RITA1-203ENST00000552495 CPEB1Q9BZB8 566 aaKnown RBP23.2■■□□□ 1.3
RITA1-203ENST00000552495 GSTO2Q9H4Y5 243 aa23.2■■□□□ 1.3
RITA1-203ENST00000552495 SLC9A3R1O14745 358 aaPredicted RBP23.19■■□□□ 1.3
RITA1-203ENST00000552495 SUPT7LO94864 414 aa23.19■■□□□ 1.3
RITA1-203ENST00000552495 PRAMEF1O95521 474 aa23.19■■□□□ 1.3
RITA1-203ENST00000552495 HSPA1AP0DMV8 641 aaKnown RBP23.19■■□□□ 1.3
RITA1-203ENST00000552495 HSPA1BP0DMV9 641 aaKnown RBP23.19■■□□□ 1.3
RITA1-203ENST00000552495 PGM1P36871 562 aa23.19■■□□□ 1.3
RITA1-203ENST00000552495 COPAP53621 1224 aa23.19■■□□□ 1.3
RITA1-203ENST00000552495 PDCD2Q16342 344 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms