RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ATP1A1P05023 1023 aaKnown RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CEACAM5P06731 702 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 PDHA1P08559 390 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 SKILP12757 684 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 EPB42P16452 691 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 PSMA2P25787 234 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 IL1R2P27930 398 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 HTR1BP28222 390 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CD1CP29017 333 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 MIPP30301 263 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 STAT1P42224 750 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 GEMIN4P57678 1058 aaKnown RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CTBSQ01459 385 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 UBXN1Q04323 297 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 TLE1Q04724 770 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 BCL2L1Q07817 233 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ELP6Q0PNE2 266 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 MTA1Q13330 715 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NFATC2Q13469 925 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 MAMLD1Q13495 774 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 INO80DQ53TQ3 878 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ANKS6Q68DC2 871 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 PNCKQ6P2M8 343 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 DCUN1D2Q6PH85 259 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 RFX8Q6ZV50 586 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 B4GALNT4Q76KP1 1039 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 FAM129CQ86XR2 697 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NAGSQ8N159 534 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 UMODL1-AS1Q8N2C9 162 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 C3orf20Q8ND61 904 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 HSPH1Q92598 858 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NKD1Q969G9 470 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NTAN1Q96AB6 310 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ARHGEF26Q96DR7 871 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 COQ10AQ96MF6 247 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CNPY3Q9BT09 278 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CINPQ9BW66 212 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 C1QTNF7Q9BXJ2 289 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 BRD8Q9H0E9 1235 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 HSD3B7Q9H2F3 369 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 WDR26Q9H7D7 661 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 ZWILCHQ9H900 591 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 SP110Q9HB58 689 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NOD2Q9HC29 1040 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 NCKIPSDQ9NZQ3 722 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 CWC15Q9P013 229 aaKnown RBP6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 KCNMB2Q9Y691 235 aa6.83□□□□□ -1.32
PRPF40B-214ENST00000551320 LOC101059948A0A1B0GTJ6 334 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ZSCAN5CA6NGD5 496 aaPredicted RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 EFCAB7A8K855 629 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 RHPN2P1A8MT19 583 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 WASH4PA8MWX3 477 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 NVLO15381 856 aaKnown RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 SUV39H1O43463 412 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 CD48P09326 243 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 LIPCP11150 499 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 CCNB1P14635 433 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 GLB1P16278 677 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PCSK2P16519 638 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 CD33P20138 364 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 EEF1GP26641 437 aaKnown RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 CCKBRP32239 447 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 GJC1P36383 396 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ADCY8P40145 1251 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PEX5P50542 639 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 BLKP51451 505 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 KIAA1024LP59773 190 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 SRSF1Q07955 248 aaKnown RBP eCLIP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 MTM1Q13496 603 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PARP15Q460N3 678 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 AFMIDQ63HM1 303 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 RAET1GQ6H3X3 334 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ACAD10Q6JQN1 1059 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 DPPA4Q7L190 304 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ARCQ7LC44 396 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 APTXQ7Z2E3 356 aaKnown RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 TIPARPQ7Z3E1 657 aaKnown RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 TMEM135Q86UB9 458 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PIM3Q86V86 326 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF677Q86XU0 584 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 DTX1Q86Y01 620 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 NRSN1Q8IZ57 195 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 NEK11Q8NG66 645 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 NAT14Q8WUY8 206 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ECHDC3Q96DC8 303 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 NUS1Q96E22 293 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 WBP1Q96G27 269 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ELMO2Q96JJ3 720 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC12A9Q9BXP2 914 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 EPN3Q9H201 632 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 ATP13A3Q9H7F0 1226 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 STARD5Q9NSY2 213 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 DTLQ9NZJ0 730 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PLAAQ9Y263 795 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 PCDHGA7Q9Y5G6 932 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms