RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ATP6V1E2Q96A05 226 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 TMEM68Q96MH6 324 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 TIMP4Q99727 224 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 EFHD1Q9BUP0 239 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 IFIH1Q9BYX4 1025 aaKnown RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 RABEP2Q9H5N1 569 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 RANGRFQ9HD47 186 aaPredicted RBP5.48□□□□□ -1.53
CPSF6-206ENST00000550987 BPIFA1Q9NP55 256 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 GIMAP4Q9NUV9 329 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 MRGBPQ9NV56 204 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 ASB6Q9NWX5 421 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 PLK2Q9NYY3 685 aa5.48□□□□□ -1.53
CPSF6-206ENST00000550987 IGSF10Q6WRI0 2623 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 ROCK1Q13464 1354 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 A0A096LPK6 155 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 FAM237AA0A1B0GTK4 181 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 SLC22A23A1A5C7 686 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 NPIPB8E9PQR5 432 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 SCAMP1O15126 338 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 RNMTO43148 476 aaKnown RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 HS6ST1O60243 411 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 ATP2C2O75185 946 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 TBCAO75347 108 aaKnown RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 ENTPD3O75355 529 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 MTA2O94776 668 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 PROS1P07225 676 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CYP2A6P11509 494 aaPredicted RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CAPN2P17655 700 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 EDN2P20800 178 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CLCN5P51795 746 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CACNA2D1P54289 1103 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 PSMC6P62333 389 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 IKQ13123 557 aaPredicted RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 STIM1Q13586 685 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 COL28A1Q2UY09 1125 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 SYTL3Q4VX76 610 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 GARNL3Q5VVW2 1013 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 GLDNQ6ZMI3 551 aaPredicted RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CADM3Q8N126 398 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CMASQ8NFW8 434 aaPredicted RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 OSR1Q8TAX0 266 aaPredicted RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 TMEM170AQ8WVE7 144 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 SGCDQ92629 289 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 KAT2AQ92830 837 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 PABPC5Q96DU9 382 aaKnown RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CDCA5Q96FF9 252 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 CCDC34Q96HJ3 373 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 RITA1Q96K30 269 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 KLHL4Q9C0H6 718 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 TOR3AQ9H497 397 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 FBXL17Q9UF56 701 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 TLK1Q9UKI8 766 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 ADAM21Q9UKJ8 722 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 PPIEQ9UNP9 301 aaKnown RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 COG5Q9UP83 839 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 RAP2CQ9Y3L5 183 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 FAM169AQ9Y6X4 670 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 TECTAO75443 2155 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 MYH14Q7Z406 1995 aaKnown RBP5.47□□□□□ -1.53
CPSF6-206ENST00000550987 POLQO75417 2590 aa5.47□□□□□ -1.53
CPSF6-206ENST00000550987 SPTA1P02549 2419 aa5.46□□□□□ -1.53
CPSF6-206ENST00000550987 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 A0A1W2PQF6 199 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 RHODO00212 210 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 MGST3O14880 152 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 UGDHO60701 494 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 RPN1P04843 607 aaKnown RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF182P17025 639 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 GABRB1P18505 474 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 MCCP23508 829 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 EPHB2P29323 1055 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 SLC15A1P46059 708 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 CAMPP49913 170 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 GMPSP49915 693 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 HSD17B4P51659 736 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 HDAC4P56524 1084 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 TMEM119Q4V9L6 283 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 KIAA1755Q5JYT7 1200 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 KIAA0930Q6ICG6 404 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 DNAAF5Q86Y56 855 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 TMC8Q8IU68 726 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 FAM185AQ8N0U4 392 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 SYT2Q8N9I0 419 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 SLC22A18Q96BI1 424 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 DEFB118Q96PH6 123 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 OR10A4Q9H209 315 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 MOV10Q9HCE1 1003 aaKnown RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 ARHGEF38Q9NXL2 777 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 OGFRQ9NZT2 677 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 PLEKHB1Q9UF11 243 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 UTS2RQ9UKP6 389 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 LAMP3Q9UQV4 416 aa5.46□□□□□ -1.54
CPSF6-206ENST00000550987 R3HDM2Q9Y2K5 976 aaKnown RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 PTRH2Q9Y3E5 179 aaKnown RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 LSM4Q9Y4Z0 139 aaKnown RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 RIC1Q4ADV7 1423 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms