RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ZNF284Q2VY69 593 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 TMEM259Q4ZIN3 620 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 USP39Q53GS9 565 aaKnown RBP10.24□□□□□ -0.77
RAB5C-207ENST00000550504 FASTKD1Q53R41 847 aaKnown RBP10.24□□□□□ -0.77
RAB5C-207ENST00000550504 KIAA0895LQ68EN5 471 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 PDPK2PQ6A1A2 396 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 ZNF470Q6ECI4 717 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 NEPROQ6NW34 567 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 NEK5Q6P3R8 708 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 BMP8AQ7Z5Y6 402 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 LDB1Q86U70 411 aaPredicted RBP10.24□□□□□ -0.77
RAB5C-207ENST00000550504 MAML2Q8IZL2 1156 aaPredicted RBP10.24□□□□□ -0.77
RAB5C-207ENST00000550504 PELI3Q8N2H9 469 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 PPM1NQ8N819 430 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 OR4L1Q8NH43 312 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 ANKRD7Q92527 254 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 SPACA7Q96KW9 195 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 PLEKHG4BQ96PX9 1271 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 AGAP2Q99490 1192 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 MYOCQ99972 504 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 FAM167BQ9BTA0 163 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 C1QTNF2Q9BXJ5 285 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 ACSS3Q9H6R3 686 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 ASB8Q9H765 288 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 UGT1A7Q9HAW7 530 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 UGT1A10Q9HAW8 530 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 UGT1A8Q9HAW9 530 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 FZD3Q9NPG1 666 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 SMYD2Q9NRG4 433 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 CATSPERZQ9NTU4 200 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 MOCS1Q9NZB8 636 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 ZFATQ9P243 1243 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 MBD1Q9UIS9 605 aaPredicted RBP10.24□□□□□ -0.77
RAB5C-207ENST00000550504 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 CRLS1Q9UJA2 301 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 APPL1Q9UKG1 709 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 PLAAQ9Y263 795 aa10.24□□□□□ -0.77
RAB5C-207ENST00000550504 CACNA1HO95180 2353 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TRPM6Q9BX84 2022 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 EXOC1LA0A1B0GW35 172 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 FAM159BA6NKW6 160 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SMIM23A6NLE4 172 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 DYNC1I1O14576 645 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 RAD51BO15315 384 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 MAP3K13O43283 966 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TDGF1P13385 188 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 ITGALP20701 1170 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 BCKDHBP21953 392 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 HOXA6P31267 233 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CA5AP35218 305 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SLC1A2P43004 574 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 GPR1P46091 355 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 PTPN5P54829 565 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 DCDC1P59894 354 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 MPP1Q00013 466 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CACNG1Q06432 222 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 IFFO1Q0D2I5 559 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CTBP1Q13363 440 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SEMA3AQ14563 771 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CASP8Q14790 479 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 IRF4Q15306 451 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 KLHL38Q2WGJ6 581 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 ATP13A5Q4VNC0 1218 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SETMARQ53H47 684 aaPredicted RBP10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SPDYCQ5MJ68 293 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 HENMT1Q5T8I9 393 aaKnown RBP10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TEDDM1Q5T9Z0 273 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 ZDHHC20Q5W0Z9 365 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 PSAPL1Q6NUJ1 521 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 KDM7AQ6ZMT4 941 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TRIM69Q86WT6 500 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 DENND6AQ8IWF6 608 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 PIANPQ8IYJ0 282 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 NRSN1Q8IZ57 195 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TRAM1L1Q8N609 369 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 PLA2G15Q8NCC3 412 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 SNX19Q92543 992 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CDKL2Q92772 493 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CYTH2Q99418 400 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 C19orf43Q9BQ61 176 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CCDC77Q9BR77 488 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 C1QTNF7Q9BXJ2 289 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 FUT8Q9BYC5 575 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CDH19Q9H159 772 aa10.23□□□□□ -0.77
RAB5C-207ENST00000550504 MBNL1Q9NR56 388 aaKnown RBP10.23□□□□□ -0.77
RAB5C-207ENST00000550504 CACNA1IQ9P0X4 2223 aa10.22□□□□□ -0.77
RAB5C-207ENST00000550504 PLXNA2O75051 1894 aa10.22□□□□□ -0.77
RAB5C-207ENST00000550504 ZNF106Q9H2Y7 1883 aaKnown RBP10.22□□□□□ -0.77
RAB5C-207ENST00000550504 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
RAB5C-207ENST00000550504 K7ESM1 405 aa10.22□□□□□ -0.77
RAB5C-207ENST00000550504 INPP4BO15327 924 aa10.22□□□□□ -0.77
RAB5C-207ENST00000550504 FAM155BO75949 473 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms