RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 PYDC1Q8WXC3 89 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 MRPS31Q92665 395 aaKnown RBP8.91□□□□□ -0.98
TMEM116-209ENST00000550020 PBXIP1Q96AQ6 731 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 FAM136AQ96C01 138 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 ATOH8Q96SQ7 321 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 HOPXQ9BPY8 73 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-209ENST00000550020 CLSTN3Q9BQT9 956 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 C1QTNF3Q9BXJ4 246 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 GPR63Q9BZJ6 419 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 SUDS3Q9H7L9 328 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-209ENST00000550020 MID1IP1Q9NPA3 183 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 MRPL17Q9NRX2 175 aaKnown RBP8.91□□□□□ -0.98
TMEM116-209ENST00000550020 NUDT4Q9NZJ9 180 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 ADA2Q9NZK5 511 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 APPL1Q9UKG1 709 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 CROTQ9UKG9 612 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 OGDHLQ9ULD0 1010 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 PPM1HQ9ULR3 514 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 FIS1Q9Y3D6 152 aa8.91□□□□□ -0.98
TMEM116-209ENST00000550020 MTF2Q9Y483 593 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-209ENST00000550020 SHROOM3Q8TF72 1996 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 A0A1W2PQ67 120 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 OR51F1A6NGY5 319 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 A6NHS1 94 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 H0YJX3 145 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 KIF3CO14782 793 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ANGPT2O15123 496 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 KLK8O60259 260 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 NRP2O60462 931 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TSPAN3O60637 253 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CLASP2O75122 1294 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 SOCS5O75159 536 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ZMPSTE24O75844 475 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 UPP2O95045 317 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 SEC24AO95486 1093 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 FGF19O95750 216 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 KLKB1P03952 638 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CYBBP04839 570 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PDHA1P08559 390 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 IRF1P10914 325 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ITGALP20701 1170 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 RPS3P23396 243 aaKnown RBP eCLIP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ABL2P42684 1182 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CCR10P46092 362 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MRPL19P49406 292 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PLK1P53350 603 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CLCQ05315 142 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TWF1Q12792 350 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 IHHQ14623 411 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PFKFB4Q16877 469 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MPPE1Q53F39 396 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 C1orf53Q5VUE5 145 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ZDHHC20Q5W0Z9 365 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TMEM198Q66K66 360 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 OGFOD2Q6N063 350 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CXorf57Q6NSI4 855 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 METTL2BQ6P1Q9 378 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TTC23LQ6PF05 361 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PAQR3Q6TCH7 311 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TMEM207Q6UWW9 146 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CCDC149Q6ZUS6 474 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 LARP4Q71RC2 724 aaKnown RBP eCLIP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TAS2R42Q7RTR8 314 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 DNAJB7Q7Z6W7 309 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ADAMTSL2Q86TH1 951 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 LDB1Q86U70 411 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PIM3Q86V86 326 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TMEM173Q86WV6 379 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 GPSM1Q86YR5 675 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 DDIASQ8IXT1 998 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ST13P4Q8IZP2 240 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ELMOD1Q8N336 334 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CPXM2Q8N436 756 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TWIST2Q8WVJ9 160 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 EXT2Q93063 718 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PTERQ96BW5 349 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MYO19Q96H55 970 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PDLIM5Q96HC4 596 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 UNKQ9C0B0 810 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 FAM192AQ9GZU8 254 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MUC13Q9H3R2 512 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 PAK6Q9NQU5 681 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 CNOT11Q9UKZ1 510 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF711Q9Y462 761 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 DTNAQ9Y4J8 743 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 TRIM17Q9Y577 477 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 SPO11Q9Y5K1 396 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 INSL5Q9Y5Q6 135 aa8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MRPL42Q9Y6G3 142 aaKnown RBP8.9□□□□□ -0.98
TMEM116-209ENST00000550020 MYO18AQ92614 2054 aaKnown RBP8.9□□□□□ -0.99
TMEM116-209ENST00000550020 C15orf38-AP3S2A0A0A6YYH1 394 aa8.89□□□□□ -0.99
TMEM116-209ENST00000550020 TMEM233B4DJY2 109 aa8.89□□□□□ -0.99
TMEM116-209ENST00000550020 UBXN8O00124 270 aa8.89□□□□□ -0.99
TMEM116-209ENST00000550020 IFRD1O00458 451 aaPredicted RBP8.89□□□□□ -0.99
TMEM116-209ENST00000550020 BTN3A1O00481 513 aa8.89□□□□□ -0.99
TMEM116-209ENST00000550020 CCL22O00626 93 aa8.89□□□□□ -0.99
TMEM116-209ENST00000550020 PRMT5O14744 637 aaPredicted RBP8.89□□□□□ -0.99
TMEM116-209ENST00000550020 RAD51BO15315 384 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms