RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 EPHA6Q9UF33 1036 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FAM153AQ9UHL3 310 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 USP15Q9Y4E8 981 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PCDHGA5Q9Y5G8 931 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SDR42E2A6NKP2 422 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ETV2O00321 342 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 RPP40O75818 363 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ESR1P03372 595 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 POU3F2P20265 443 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CCND1P24385 295 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PTGER3P43115 390 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 PDK4Q16654 411 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CA9Q16790 459 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CAPRIN2Q6IMN6 1127 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KIAA1211LQ6NV74 962 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 RAPH1Q70E73 1250 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KMT5CQ86Y97 462 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 LAS2Q8IYD9 372 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SLC22A15Q8IZD6 547 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ZSCAN1Q8NBB4 408 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TM9SF2Q99805 663 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CCM2Q9BSQ5 444 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 SGPP1Q9BX95 441 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 POLR1EQ9GZS1 481 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 GOLPH3Q9H4A6 298 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ITM2CQ9NQX7 267 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ASAH2Q9NR71 780 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 KLHL11Q9NVR0 708 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ARGLU1Q9NWB6 273 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 MARCH2Q9P0N8 246 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 ERVW-1Q9UQF0 538 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 CDYLQ9Y232 598 aa4.88□□□□□ -1.63
SCAF11-212ENST00000549162 R3HDM2Q9Y2K5 976 aaKnown RBP4.88□□□□□ -1.63
SCAF11-212ENST00000549162 TRBV23-1A0A0A0MS06 115 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TTC36A6NLP5 189 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 FOXE1O00358 373 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ADAM12O43184 909 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 URI1O94763 535 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PRKD3O94806 890 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 POP4O95707 220 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SBK3P0C264 359 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SMIM10L1P0DMW3 83 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 LAMP2P13473 410 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ACADLP28330 430 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 RORAP35398 523 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 HSD17B3P37058 310 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ARL4AP40617 200 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 RAP1GAPP47736 663 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ILKQ13418 452 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ACAP2Q15057 778 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 FUT11Q495W5 492 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SLC39A12Q504Y0 691 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PLA2G2CQ5R387 149 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GPRC6AQ5T6X5 926 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MLIPQ5VWP3 458 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CENPUQ71F23 418 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 KBTBD6Q86V97 674 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ARHGAP24Q8N264 748 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ELMOD1Q8N336 334 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 RHBDD1Q8TEB9 315 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 IGSF8Q969P0 613 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GAL3ST3Q96A11 431 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SMIM10Q96HG1 83 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 APOPT1Q96IL0 206 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PLIN2Q99541 437 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TBL1YQ9BQ87 522 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TTYH1Q9H313 450 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 SAR1AQ9NR31 198 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 NCKIPSDQ9NZQ3 722 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 OR12D3Q9UGF7 316 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TRPS1Q9UHF7 1281 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 DCDC2Q9UHG0 476 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CD207Q9UJ71 328 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 INTS6Q9UL03 887 aaKnown RBP4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MAN2B2Q9Y2E5 1009 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ZNF451Q9Y4E5 1061 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 OARD1Q9Y530 152 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 HTR3EA5X5Y0 456 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TSPAN3O60637 253 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TMEM63AO94886 807 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 KRT14P02533 472 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 KRT15P19012 456 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 HNMTP50135 292 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CLCN7P51798 805 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PMS2P54278 862 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CDH8P55286 799 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 CFHR1Q03591 330 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 MGAT5Q09328 741 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 ELP6Q0PNE2 266 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 STK11Q15831 433 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 LDLRAP1Q5SW96 308 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 PIP5KL1Q5T9C9 394 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 TXNRD3NBQ6F5E7 133 aa4.87□□□□□ -1.63
SCAF11-212ENST00000549162 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms