RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 C16orf96A6NNT2 1141 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 MT-ND1P03886 318 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ZIK1Q3SY52 487 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 TAF2Q6P1X5 1199 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 NOTUMQ6P988 496 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 RAB44Q7Z6P3 723 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 TOP6BLQ8N6T0 577 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 SCAIQ8N9R8 606 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 PDZD8Q8NEN9 1154 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 UBXN8O00124 270 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 OPRL1P41146 370 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 KCNK10P57789 538 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 SULF1Q8IWU6 871 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 DCPSQ96C86 337 aaKnown RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 BIRC7Q96CA5 298 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 SH3YL1Q96HL8 342 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ADNPQ9H2P0 1102 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 HMG20AQ9NP66 347 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 HPS4Q9NQG7 708 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 PCDHGA11Q9Y5H2 935 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 H0Y858 1186 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 TNPO2O14787 897 aaKnown RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 MATN3O15232 486 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 USP17L7P0C7H9 530 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 BDNFP23560 247 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 SHMT2P34897 504 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ALDH3A2P51648 485 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 PLA2G16P53816 162 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ARSFP54793 590 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 SKIV2LQ15477 1246 aaKnown RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 KANK2Q63ZY3 851 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 THAP5Q7Z6K1 395 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 PROSER1Q86XN7 944 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 TTC30BQ8N4P2 665 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ZNF419Q96HQ0 510 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 MRGPRX2Q96LB1 330 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 RNF145Q96MT1 663 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 ALPK1Q96QP1 1244 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 YIPF2Q9BWQ6 316 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 TLR9Q9NR96 1032 aa23.05■■□□□ 1.28
NPAS3-206ENST00000548645 WARS2Q9UGM6 360 aaKnown RBP23.05■■□□□ 1.28
NPAS3-206ENST00000548645 WDR90Q96KV7 1748 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 ZNF286BP0CG31 522 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 FUT11Q495W5 492 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 TMEM207Q6UWW9 146 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 PTGR2Q8N8N7 351 aaPredicted RBP23.04■■□□□ 1.28
NPAS3-206ENST00000548645 SMG8Q8ND04 991 aaKnown RBP23.04■■□□□ 1.28
NPAS3-206ENST00000548645 EXT2Q93063 718 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 GOLGA2P5Q9HBQ8 144 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 DNAJC25-GNG10A0A024R161 153 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 VPS4BO75351 444 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 CRHBPP24387 322 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 IDUAP35475 653 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 RABGGTBP53611 331 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
NPAS3-206ENST00000548645 GALNT7Q86SF2 657 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 BPIFB1Q8TDL5 484 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 RNF34Q969K3 372 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 KLK14Q9P0G3 267 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 POLG2Q9UHN1 485 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 MYLKQ15746 1914 aa23.04■■□□□ 1.28
NPAS3-206ENST00000548645 CCDC162PA2VCL2 907 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 RSL1D1O76021 490 aaKnown RBP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 WISP3O95389 354 aaPredicted RBP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 SOX11P35716 441 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 APLP1P51693 650 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 LILRA4P59901 499 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 EDEM1Q92611 657 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 SLX1AQ9BQ83 275 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 WDR12Q9GZL7 423 aaKnown RBP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 MCM3APO60318 1980 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 PPP6CO00743 305 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 THRBP10828 461 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 CDKN2DP55273 166 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 FOXA1P55317 472 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 DAG1Q14118 895 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 TMEM214Q6NUQ4 689 aaKnown RBP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 R3HCC1LQ7Z5L2 792 aaKnown RBP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 ITIH5Q86UX2 942 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 CILP2Q8IUL8 1156 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 SPARTQ8N0X7 666 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 MINDY2Q8NBR6 621 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 PTERQ96BW5 349 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 RBM22Q9NW64 420 aaKnown RBP eCLIP23.03■■□□□ 1.28
NPAS3-206ENST00000548645 GPR45Q9Y5Y3 372 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 V9GYQ6 96 aa23.03■■□□□ 1.28
NPAS3-206ENST00000548645 H3BMM5 538 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 MAFKO60675 156 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 HLA-DQB2P05538 268 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 LINC00032P0C843 101 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 HTR1EP28566 365 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 LDLRAP1Q5SW96 308 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 CRTC3Q6UUV7 619 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 TFAP2DQ7Z6R9 452 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 ARHGAP12Q8IWW6 846 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 C8orf59Q8N0T1 100 aaPredicted RBP23.02■■□□□ 1.28
NPAS3-206ENST00000548645 HDAC2Q92769 488 aaKnown RBP23.02■■□□□ 1.28
NPAS3-206ENST00000548645 VPS33AQ96AX1 596 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 TUBB1Q9H4B7 451 aa23.02■■□□□ 1.28
NPAS3-206ENST00000548645 AQP9O43315 295 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms