RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MX2P20592 715 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 CD86P42081 329 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 CFHR1Q03591 330 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 ZBTB17Q13105 803 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 SRSF6Q13247 344 aaKnown RBP13.27□□□□□ -0.29
CPSF6-204ENST00000547486 NR1D2Q14995 579 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 QPCTQ16769 361 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 ZFYVE27Q5T4F4 411 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 NKAIN2Q5VXU1 208 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 INO80CQ6PI98 192 aaPredicted RBP13.27□□□□□ -0.29
CPSF6-204ENST00000547486 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF765Q7L2R6 523 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 JAMLQ86YT9 394 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 NRSN1Q8IZ57 195 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 EXD1Q8NHP7 514 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 TTC9Q92623 222 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 EID2BQ96D98 161 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 LYSMD1Q96S90 227 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 NUDT22Q9BRQ3 303 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 PRKAB1Q9Y478 270 aa13.27□□□□□ -0.29
CPSF6-204ENST00000547486 OAS3Q9Y6K5 1087 aaKnown RBP13.27□□□□□ -0.29
CPSF6-204ENST00000547486 PRAMEF33A0A0G2JMD5 474 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 LRRD1A4D1F6 860 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ANKRD66B4E2M5 251 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 NVLO15381 856 aaKnown RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 PRAMEF10O60809 474 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 CPNE6O95741 557 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 TPM3P06753 285 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 CCL4P13236 92 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ACTR1BP42025 376 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ACTR1AP61163 376 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 RPL26P61254 145 aaKnown RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 RHDQ02161 417 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 PPIDQ08752 370 aaKnown RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 PHF19Q5T6S3 580 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 SLC9A4Q6AI14 798 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 NPNTQ6UXI9 565 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 CCDC81Q6ZN84 652 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 PIM3Q86V86 326 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 VSTM4Q8IW00 320 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 USP7Q93009 1102 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 OR2M4Q96R27 311 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 CCNL2Q96S94 520 aaPredicted RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 SEMA4CQ9C0C4 833 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ABHD10Q9NUJ1 306 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 FOXJ2Q9P0K8 574 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 LCMT1Q9UIC8 334 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 ACSL6Q9UKU0 697 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
CPSF6-204ENST00000547486 HEY1Q9Y5J3 304 aa13.26□□□□□ -0.29
CPSF6-204ENST00000547486 IGHV5-10-1A0A0J9YXX1 117 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 FADS2P1A8MWK0 482 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 C9orf172C9J069 976 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 DNAJC6O75061 913 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 MFAP3LO75121 409 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 SPINT3P49223 89 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 IFI35P80217 286 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 TRIM14Q14142 442 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 LY6DQ14210 128 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 MAP9Q49MG5 647 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 TAF1BQ53T94 588 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 KDELC2Q7Z4H8 507 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 ZFAND4Q86XD8 727 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 TMEM159Q96B96 161 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 WBP1Q96G27 269 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 TRIB3Q96RU7 358 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 MLPHQ9BV36 600 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 BRD8Q9H0E9 1235 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 CDH19Q9H159 772 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 FAM83DQ9H4H8 585 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 WDR70Q9NW82 654 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
CPSF6-204ENST00000547486 TMEM9Q9P0T7 183 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 ZNHIT2Q9UHR6 403 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 HYOU1Q9Y4L1 999 aa13.25□□□□□ -0.29
CPSF6-204ENST00000547486 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF487B1APH4 448 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 MTA2O94776 668 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 ASMTLO95671 621 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 PYGLP06737 847 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 CA4P22748 312 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 MPSTP25325 297 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 GPR3P46089 330 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 MAPK10P53779 464 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms