RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 DRAXINQ8NBI3 349 aaPredicted RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 LRRC58Q96CX6 371 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 TMEM74Q96NL1 305 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 ACOX2Q99424 681 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 CLK4Q9HAZ1 481 aaKnown RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 MRGBPQ9NV56 204 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 OAZ3Q9UMX2 235 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 PRG3Q9Y2Y8 225 aaPredicted RBP15.75■□□□□ 0.11
LDLR-204ENST00000545707 HTTP42858 3142 aa15.75■□□□□ 0.11
LDLR-204ENST00000545707 CDC7O00311 574 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 ARPC2O15144 300 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 INPP4BO15327 924 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 RAMP2O60895 175 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 ZNF623O75123 536 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 BAIAP3O94812 1187 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 OR1E1P30953 314 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 CLCQ05315 142 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 KANK2Q63ZY3 851 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 RAB44Q7Z6P3 723 aaPredicted RBP15.74■□□□□ 0.11
LDLR-204ENST00000545707 OR4L1Q8NH43 312 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 NUDT8Q8WV74 236 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 FBXL20Q96IG2 436 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 NSMCE3Q96MG7 304 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 CYP2S1Q96SQ9 504 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 MTG1Q9BT17 334 aaPredicted RBP15.74■□□□□ 0.11
LDLR-204ENST00000545707 C1orf50Q9BV19 199 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 ABCD2Q9UBJ2 740 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 A0A0U1RQS6 177 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 FGF4P08620 206 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 LBPP18428 481 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 ARPP19P56211 112 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 NRG1Q02297 640 aaPredicted RBP15.74■□□□□ 0.11
LDLR-204ENST00000545707 ADRM1Q16186 407 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 SETMARQ53H47 684 aaPredicted RBP15.74■□□□□ 0.11
LDLR-204ENST00000545707 PAGE3Q5JUK9 113 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 UGT3A1Q6NUS8 523 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 OFCC1Q8IZS5 231 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 TTC16Q8NEE8 873 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 CYGBQ8WWM9 190 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 GAB3Q8WWW8 586 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 EXOC2Q96KP1 924 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 HOPXQ9BPY8 73 aaPredicted RBP15.74■□□□□ 0.11
LDLR-204ENST00000545707 CATSPERZQ9NTU4 200 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 GALNT8Q9NY28 637 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 EBF1Q9UH73 591 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 RNF112Q9ULX5 631 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 TMCO1Q9UM00 188 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 SCML2Q9UQR0 700 aa15.74■□□□□ 0.11
LDLR-204ENST00000545707 A0A0D9SEW6 157 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 TMX2-CTNND1H3BSU7 103 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 CRCPO75575 148 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 RHOBTB1O94844 696 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 PENKP01210 267 aaPredicted RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 SLC26A3P40879 764 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 GALK1P51570 392 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ATP6V0D1P61421 351 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 CTBSQ01459 385 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 LPIN1Q14693 890 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 PTPRRQ15256 657 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 CYP51A1Q16850 503 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 HABP4Q5JVS0 413 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 CROCCQ5TZA2 2017 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 MRNIPQ6NTE8 343 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 TTC33Q6PID6 262 aaPredicted RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 GALNT7Q86SF2 657 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 CPNE9Q8IYJ1 553 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 TADA1Q96BN2 335 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SLC30A3Q99726 388 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 AARSD1Q9BTE6 412 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 SLC52A3Q9NQ40 469 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SDR39U1Q9NRG7 319 aaPredicted RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 AGPAT4Q9NRZ5 378 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 NOD1Q9Y239 953 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SLC27A5Q9Y2P5 690 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 MED16Q9Y2X0 877 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ASPDHA6ND91 283 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 FOXD2O60548 495 aaPredicted RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 KPNA6O60684 536 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 RPP40O75818 363 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 CELF2O95319 508 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 AKR1A1P14550 325 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 IL10P22301 178 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 STT3AP46977 705 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 CDK9P50750 372 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 UFM1P61960 85 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SERINC3Q13530 473 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ZNF235Q14590 738 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 PLA2G4EQ3MJ16 856 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 C10orf120Q5SQS8 335 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 BLOC1S3Q6QNY0 202 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ADGRG5Q8IZF4 528 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 FBXO39Q8N4B4 442 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 MINDY1Q8N5J2 469 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ZUFSPQ96AP4 578 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 ADI1Q9BV57 179 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 TSR3Q9UJK0 312 aaKnown RBP15.73■□□□□ 0.11
LDLR-204ENST00000545707 Q9Y3F1 56 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SPO11Q9Y5K1 396 aa15.73■□□□□ 0.11
LDLR-204ENST00000545707 SLC12A8A0AV02 714 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms