RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DAOAP59103 153 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 CAPN13Q6MZZ7 669 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-209ENST00000545689 RHBDF2Q6PJF5 856 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 AGAP2Q99490 1192 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 ARHGEF3Q9NR81 526 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 CLIC5Q9NZA1 410 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 GMIPQ9P107 970 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 PCDHB9Q9Y5E1 797 aa12.49□□□□□ -0.41
COL4A6-209ENST00000545689 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 SCELO95171 688 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 NTRK1P04629 796 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 CD48P09326 243 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 SLC6A2P23975 617 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 IDH3AP50213 366 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 SP3Q02447 781 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 LAPTM5Q13571 262 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 PEX6Q13608 980 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 HNRNPDQ14103 355 aaKnown RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 NR2F1P10589 423 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 LAG3P18627 525 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 HPS6Q86YV9 775 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ARMC8Q8IUR7 673 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 OR8D1Q8WZ84 308 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 FBXL18Q96ME1 805 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 CTPS1P17812 591 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 TAF10Q12962 218 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 CPTPQ5TA50 214 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 MPP5Q8N3R9 675 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 FIBCD1Q8N539 461 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 FNDC11Q9BVV2 318 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 EPB41L1Q9H4G0 881 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 NOL6Q9H6R4 1146 aaKnown RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 CNTN6Q9UQ52 1028 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 FADS3Q9Y5Q0 445 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 MRPL42Q9Y6G3 142 aaKnown RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 AP1S1P61966 158 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ARL13AQ5H913 290 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 C16orf62Q7Z3J2 963 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 OR4K2Q8NGD2 314 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ZNF490Q9ULM2 529 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 A0A0G2JLL6 359 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ATP6AP2A0A1C7CYW4 349 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ATP6AP2O75787 350 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 C22orf31O95567 290 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 ADH1CP00326 375 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 HCAR3P49019 387 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 PRRT2Q7Z6L0 340 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-209ENST00000545689 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 NAT8LQ8N9F0 302 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 PIK3C3Q8NEB9 887 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 CORO1BQ9BR76 489 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
COL4A6-209ENST00000545689 SOWAHBA6NEL2 793 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PER2O15055 1255 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CLCQ05315 142 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CPSF6Q16630 551 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 GJC2Q5T442 439 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 GLYATQ6IB77 296 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 FAM220AQ7Z4H9 259 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 RAVER1Q8IY67 606 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 UBR7Q8N806 425 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 TEX47Q8TBZ9 253 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 FAM84AQ96KN4 292 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 LOC100506127A0A0U1RQW1 187 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PIRTP0C851 137 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 RPL26P61254 145 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 KLHL17Q6TDP4 642 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 THAP5Q7Z6K1 395 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PNPT1Q8TCS8 783 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 RAPGEFL1Q9UHV5 662 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 ACSL4O60488 711 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 THOP1P52888 689 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CDH13P55290 713 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CSNK2BP67870 215 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 RFTN1Q14699 578 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 DLG2Q15700 870 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 AP5B1Q2VPB7 878 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 SDHAF4Q5VUM1 108 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CHSY3Q70JA7 882 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 488.3 ms