RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TTC33Q6PID6 262 aaPredicted RBP14.99□□□□□ -0.01
USP28-214ENST00000545540 LINGO4Q6UY18 593 aa14.99□□□□□ -0.01
USP28-214ENST00000545540 LZTR1Q8N653 840 aa14.99□□□□□ -0.01
USP28-214ENST00000545540 PTTG2Q9NZH5 202 aa14.99□□□□□ -0.01
USP28-214ENST00000545540 TCRBV3S1A0A5B6 114 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 FXYD1O00168 92 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 PFDN1O60925 122 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 NR4A1P22736 598 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 SLC6A2P23975 617 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 RPS24P62847 133 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 SIDT2Q8NBJ9 832 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 OR10Q1Q8NGQ4 319 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 TSPAN17Q96FV3 270 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 VPS50Q96JG6 964 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 ZNF37AP17032 561 aaPredicted RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 ADSLP30566 484 aaPredicted RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 RPL9P32969 192 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 CLCQ05315 142 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 TUSC3Q13454 348 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 NEDD8Q15843 81 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 RBBP7Q16576 425 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 ZNF598Q86UK7 904 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 MIER2Q8N344 545 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 PPM1MQ96MI6 270 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 KATNAL1Q9BW62 490 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 DMTF1Q9Y222 760 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 DLGAP1O14490 977 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 IST1P53990 364 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 HUNKP57058 714 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 CREB5Q02930 508 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 MAPRE2Q15555 327 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 NHSL2Q5HYW2 709 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 ANKRD34AQ69YU3 496 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 TMEM214Q6NUQ4 689 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 DNAJC14Q6Y2X3 702 aaPredicted RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 CARM1Q86X55 608 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 PIANPQ8IYJ0 282 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 OR52B6Q8NGF0 335 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 SGCDQ92629 289 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 FBXO32Q969P5 355 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 LRRC58Q96CX6 371 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 ZFRQ96KR1 1074 aaKnown RBP14.98□□□□□ -0.01
USP28-214ENST00000545540 SERPINB11Q96P15 392 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 MARCH2Q9P0N8 246 aa14.98□□□□□ -0.01
USP28-214ENST00000545540 H3BNH8 94 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ARPC2O15144 300 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 GPR182O15218 404 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 HK2P52789 917 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 LPIN1Q14693 890 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 PTPRNQ16849 979 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 TBPL2Q6SJ96 375 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 C16orf59Q7L2K0 433 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 SLC22A9Q8IVM8 553 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 OR4L1Q8NH43 312 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
USP28-214ENST00000545540 ATXN10Q9UBB4 475 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 COMMD10Q9Y6G5 202 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 DNAH14Q0VDD8 3507 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 MROH6A6NGR9 719 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ECI2O75521 394 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 SNAP29O95721 258 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 DGKQP52824 942 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 NRG1Q02297 640 aaPredicted RBP14.97□□□□□ -0.01
USP28-214ENST00000545540 ANKDD1AQ495B1 522 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 TMEM259Q4ZIN3 620 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 SLC2A7Q6PXP3 512 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 LGI2Q8N0V4 545 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 FBXO39Q8N4B4 442 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 PCYOX1LQ8NBM8 494 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 OR6K2Q8NGY2 324 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ERLEC1Q96DZ1 483 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ABCG8Q9H221 673 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 CATSPERZQ9NTU4 200 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 RSL24D1Q9UHA3 163 aaKnown RBP14.97□□□□□ -0.01
USP28-214ENST00000545540 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
USP28-214ENST00000545540 ZNF225Q9UK10 706 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 MIA3Q5JRA6 1907 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ANKRD33BA6NCL7 494 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 SLC22A2O15244 555 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ASGR1P07306 291 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 MTPNP58546 118 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 KIAA0408Q6ZU52 694 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 LCA5Q86VQ0 697 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 OR2T11Q8NH01 316 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 CCDC126Q96EE4 140 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 RNF145Q96MT1 663 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 EFHD1Q9BUP0 239 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 OSBPL11Q9BXB4 747 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 MFSD1Q9H3U5 465 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 ZMYM5Q9UJ78 669 aa14.97□□□□□ -0.01
USP28-214ENST00000545540 A0A0U1RQF3 1178 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 SLC7A4O43246 635 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 OR4F21O95013 312 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 GUCA1CO95843 209 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 HSPA8P11142 646 aaKnown RBP14.96□□□□□ -0.01
USP28-214ENST00000545540 PABPC1LQ4VXU2 614 aaKnown RBP14.96□□□□□ -0.01
USP28-214ENST00000545540 GPR107Q5VW38 600 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 PSAPL1Q6NUJ1 521 aa14.96□□□□□ -0.01
USP28-214ENST00000545540 CDKN2AIPNLQ96HQ2 116 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms