RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 MS4A13Q5J8X5 152 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 LCN8Q6JVE9 175 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 MRNIPQ6NTE8 343 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF549Q6P9A3 640 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SPPL2CQ8IUH8 684 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SCN4BQ8IWT1 228 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 DDIASQ8IXT1 998 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 ARRDC2Q8TBH0 407 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 PEX13Q92968 403 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 TSEN34Q9BSV6 310 aaKnown RBP16.54■□□□□ 0.24
KDM2B-216ENST00000543025 POPDC3Q9HBV1 291 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 MYO16Q9Y6X6 1858 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SAC3D1A6NKF1 404 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 UBXN8O00124 270 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 ZNF623O75123 536 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 BMP10O95393 424 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 GOT2P00505 430 aaKnown RBP16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SUOXP51687 545 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 PLOD1Q02809 727 aaPredicted RBP16.54■□□□□ 0.24
KDM2B-216ENST00000543025 TNK2Q07912 1038 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 MSANTD2Q6P1R3 559 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 CBR4Q8N4T8 237 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 TUBGCP3Q96CW5 907 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 FEM1CQ96JP0 617 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SUSD3Q96L08 255 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 SDR39U1Q9NRG7 319 aaPredicted RBP16.54■□□□□ 0.24
KDM2B-216ENST00000543025 AGPAT4Q9NRZ5 378 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■□□□□ 8.9
KDM2B-216ENST00000543025 ACTR3BQ9P1U1 418 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 GIMAP2Q9UG22 337 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 EGFL7Q9UHF1 273 aa16.54■□□□□ 0.24
KDM2B-216ENST00000543025 FXYD1O00168 92 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 CD3EAPO15446 510 aaKnown RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 CNTN5O94779 1100 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 ITGB1P05556 798 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 MTHFD2P13995 350 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 LBPP18428 481 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 FASP25445 335 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TBX4P57082 545 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TIAL1Q01085 375 aaKnown RBP eCLIP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 YWHAHQ04917 246 aaPredicted RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 GRB7Q14451 532 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 OR4D1Q15615 310 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 KCTD21Q4G0X4 260 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 MON1AQ86VX9 555 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 GPR150Q8NGU9 434 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 GAB3Q8WWW8 586 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 SLC45A3Q96JT2 553 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TUBA8Q9NY65 449 aaPredicted RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 CIDEBQ9UHD4 219 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 OGDHLQ9ULD0 1010 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 GFAPP14136 432 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 HGFP14210 728 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TYMPP19971 482 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 SLC6A2P23975 617 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 FOXM1Q08050 763 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 RPS6KA2Q15349 733 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 GDF6Q6KF10 455 aaPredicted RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 EPHX4Q8IUS5 362 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 PGBD5Q8N414 524 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 RNF217Q8TC41 542 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 LRRC58Q96CX6 371 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 UROC1Q96N76 676 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 ATOH8Q96SQ7 321 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TUBB1Q9H4B7 451 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 TFB2MQ9H5Q4 396 aaKnown RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 POLG2Q9UHN1 485 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 PTBP2Q9UKA9 531 aaKnown RBP16.53■□□□□ 0.24
KDM2B-216ENST00000543025 ARL5AQ9Y689 179 aa16.53■□□□□ 0.24
KDM2B-216ENST00000543025 A0A1W2PQ45 241 aaPredicted RBP16.52■□□□□ 0.24
KDM2B-216ENST00000543025 A0A1W2PQY0 241 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 LRRC14BA6NHZ5 514 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 OR4Q2P0C623 313 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 IDO1P14902 403 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 CAPRIN1Q14444 709 aaKnown RBP16.52■□□□□ 0.24
KDM2B-216ENST00000543025 SPATS1Q496A3 300 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 TNIP2Q8NFZ5 429 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 BLOC1S5Q8TDH9 187 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 NSUN5Q96P11 429 aaKnown RBP16.52■□□□□ 0.24
KDM2B-216ENST00000543025 KCNA7Q96RP8 456 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 C9orf16Q9BUW7 83 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 ADI1Q9BV57 179 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 PREBQ9HCU5 417 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 SMOXQ9NWM0 555 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 CMTM6Q9NX76 183 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 SCML2Q9UQR0 700 aa16.52■□□□□ 0.24
KDM2B-216ENST00000543025 TDRD15B5MCY1 1934 aaKnown RBP16.52■□□□□ 0.23
KDM2B-216ENST00000543025 IGLV3-10A0A075B6K4 115 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 A0A087WXM4 84 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 H3BMM5 538 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 DLGAP1O14490 977 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 HLA-DPA1P20036 260 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 MYF6P23409 242 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 ETFBP38117 255 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 RANBP1P43487 201 aa16.52■□□□□ 0.23
KDM2B-216ENST00000543025 MGAT3Q09327 533 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms